Literature DB >> 29118175

Predicting Invasive Aspergillosis in Hematology Patients by Combining Clinical and Genetic Risk Factors with Early Diagnostic Biomarkers.

P Lewis White1, Christian Parr2, Rosemary A Barnes2.   

Abstract

Personalized medicine provides a strategic approach to the management of IA. The incidence of IA in high-risk hematology populations is relatively low (<10%), despite unavoidable Aspergillus exposure in patients with a potentially similar clinical risk. Nonclinical variables, including genetic mutations that increase susceptibility to IA, could explain why only certain patients develop the disease. This study screened for mutations in 322 hematology patients classified according to IA status and developed a predictive model based on genetic risk, established clinical risk factors, and diagnostic biomarkers. Genetic markers were determined by real-time PCR and, with clinical risk factors and Aspergillus PCR results, subjected to multilogistic regression analysis to identify a best-fit model for predicting IA. The probability of IA was calculated, and an optimal threshold was determined. Mutations in dectin-1 (rs7309123) and DC-SIGN (rs11465384 and rs7248637), allogeneic stem cell transplantation, respiratory virus infection, and Aspergillus PCR positivity were all significant risk factors for developing IA and were combined in a predictive model. An optimal threshold requiring three positive factors generated a mean sensitivity/specificity of 70.4%/89.2% and a probability of developing IA of 56.7%. In patients with no risk factors, the probability of developing IA was 2.4%, compared to >79.1% in patients with four or more factors. Using a risk threshold of 50%, preemptive therapy would have been prescribed for 8.4% of the population. This pilot study shows that patients can be stratified according to risk of IA, providing personalized medicine based on strategic evidence for the management of IA. Further studies are required to confirm this approach.
Copyright © 2017 American Society for Microbiology.

Entities:  

Keywords:  Aspergillus PCR; SNPs; invasive aspergillosis; predictive model; risk factors

Mesh:

Substances:

Year:  2017        PMID: 29118175      PMCID: PMC5744209          DOI: 10.1128/JCM.01122-17

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  24 in total

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Authors:  Penelope D Barnes; Kieren A Marr
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3.  Validation of single nucleotide polymorphisms in invasive aspergillosis following hematopoietic cell transplantation.

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Journal:  J Clin Microbiol       Date:  2006-05       Impact factor: 5.948

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Authors:  M von Eiff; N Roos; R Schulten; M Hesse; M Zühlsdorf; J van de Loo
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8.  Dectin-1 and DC-SIGN polymorphisms associated with invasive pulmonary Aspergillosis infection.

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Journal:  PLoS One       Date:  2012-02-27       Impact factor: 3.240

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10.  Pivotal advance: The promotion of soluble DC-SIGN release by inflammatory signals and its enhancement of cytomegalovirus-mediated cis-infection of myeloid dendritic cells.

Authors:  N Plazolles; J-M Humbert; L Vachot; B Verrier; C Hocke; F Halary
Journal:  J Leukoc Biol       Date:  2010-10-12       Impact factor: 4.962

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Review 2.  Aspergillus fumigatus and aspergillosis: From basics to clinics.

Authors:  A Arastehfar; A Carvalho; J Houbraken; L Lombardi; R Garcia-Rubio; J D Jenks; O Rivero-Menendez; R Aljohani; I D Jacobsen; J Berman; N Osherov; M T Hedayati; M Ilkit; D James-Armstrong; T Gabaldón; J Meletiadis; M Kostrzewa; W Pan; C Lass-Flörl; D S Perlin; M Hoenigl
Journal:  Stud Mycol       Date:  2021-05-10       Impact factor: 16.097

Review 3.  Incorporating the Detection of Single Nucleotide Polymorphisms Associated With Invasive Aspergillosis Into the Clinic.

Authors:  P Lewis White; Jessica S Price
Journal:  Front Cell Infect Microbiol       Date:  2022-04-12       Impact factor: 6.073

Review 4.  Recent Advances and Novel Approaches in Laboratory-Based Diagnostic Mycology.

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Journal:  J Fungi (Basel)       Date:  2021-01-11

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6.  A Novel Strategy to Identify Haematology Patients at High Risk of Developing Aspergillosis.

Authors:  James S Griffiths; P Lewis White; Aiysha Thompson; Diogo M da Fonseca; Robert J Pickering; Wendy Ingram; Keith Wilson; Rosemary Barnes; Philip R Taylor; Selinda J Orr
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8.  Treatment with etanercept and low monocyte concentration contribute to the risk of invasive aspergillosis in patients post allogeneic stem cell transplantation.

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Journal:  Sci Rep       Date:  2019-11-21       Impact factor: 4.379

9.  A Human Dectin-2 Deficiency Associated With Invasive Aspergillosis.

Authors:  James S Griffiths; P Lewis White; Magdalena A Czubala; Elena Simonazzi; Mariolina Bruno; Aiysha Thompson; Pierre J Rizkallah; Mark Gurney; Diogo M da Fonseca; Julian R Naglik; Wendy Ingram; Keith Wilson; Frank L van de Veerdonk; Rosemary Barnes; Philip R Taylor; Selinda J Orr
Journal:  J Infect Dis       Date:  2021-10-13       Impact factor: 5.226

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