| Literature DB >> 29118029 |
Amber K Weiner1,2,3, Simone Sidoli3, Sharon J Diskin1,2, Benjamin A Garcia4,3.
Abstract
Here we present a free interactive web tool to process and visualize proteomics data sets with a single click. GiaPronto can process all proteomics quantification methods, i.e. label-free, SILAC and isobaric labeling, and analyze post-translational modifications (PTMs). The software performs normalization and statistics, assists determination of regulated proteins, biomarkers and Gene Ontology (GO) enrichment, and provides high resolution images and tables for further data analysis. We foresee that GiaPronto will become the most rapid and simple tool for assessing data quality and determining most relevant features of proteomic data sets. GiaPronto is available at giapronto.diskinlab.org.Keywords: Algorithms; Bioinformatics software; Data Analysis; Data Visualization; Data standards; Label-free quantification; SILAC
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Year: 2017 PMID: 29118029 PMCID: PMC6030729 DOI: 10.1074/mcp.TIR117.000438
Source DB: PubMed Journal: Mol Cell Proteomics ISSN: 1535-9476 Impact factor: 5.911