Literature DB >> 29116523

ORFeome Phage Display.

Jonas Zantow1, Gustavo Marçal Schmidt Garcia Moreira2, Stefan Dübel1, Michael Hust3.   

Abstract

ORFeome phage display allows the efficient functional screening of entire proteomes or even metaproteomes to identify immunogenic proteins. For this purpose, randomly fragmented, whole genomes or metagenomes are cloned into a phage-display vector allowing positive selection for open reading frames (ORF) to improve the library quality. These libraries display all possible proteins encoded by a pathogen or a microbiome on the phage surface. Consequently, immunogenic proteins can be selected from these libraries using disease-related immunoglobulins from patient serum. ORFeome phage display in particular allows the identification of immunogenic proteins that are only expressed in the host-pathogen interaction but not in cultivation, as well as the detection of very low expressed and very small immunogens and immunogenic proteins of non-cultivable organisms. The identified immunogenic proteins are potential biomarkers for the development of diagnostic assays or vaccines. These articles will give an introduction to ORFeome phage-display technology and give detailed protocols to identify immunogenic proteins by phage display.

Entities:  

Keywords:  Antigen; Biomarker identification; Genomic libraries; Immunogenic proteins; ORFeome phage display; Oligopeptide phage display; Open reading frame (ORF) selection; cDNA libraries

Mesh:

Substances:

Year:  2018        PMID: 29116523     DOI: 10.1007/978-1-4939-7447-4_27

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  5 in total

1.  ORFeome Phage Display Reveals a Major Immunogenic Epitope on the S2 Subdomain of SARS-CoV-2 Spike Protein.

Authors:  Rico Ballmann; Sven-Kevin Hotop; Federico Bertoglio; Stephan Steinke; Philip Alexander Heine; M Zeeshan Chaudhry; Dieter Jahn; Boas Pucker; Fausto Baldanti; Antonio Piralla; Maren Schubert; Luka Čičin-Šain; Mark Brönstrup; Michael Hust; Stefan Dübel
Journal:  Viruses       Date:  2022-06-17       Impact factor: 5.818

2.  InteractomeSeq: a web server for the identification and profiling of domains and epitopes from phage display and next generation sequencing data.

Authors:  Simone Puccio; Giorgio Grillo; Arianna Consiglio; Maria Felicia Soluri; Daniele Sblattero; Diego Cotella; Claudio Santoro; Sabino Liuni; Gianluca De Bellis; Enrico Lugli; Clelia Peano; Flavio Licciulli
Journal:  Nucleic Acids Res       Date:  2020-07-02       Impact factor: 16.971

3.  Network Organization of Antibody Interactions in Sequence and Structure Space: the RADARS Model.

Authors:  József Prechl
Journal:  Antibodies (Basel)       Date:  2020-05-06

4.  Discovery of Leptospira spp. seroreactive peptides using ORFeome phage display.

Authors:  Siti Roszilawati Ramli; Gustavo M S G Moreira; Jonas Zantow; Marga G A Goris; Van Kinh Nguyen; Natalia Novoselova; Frank Pessler; Michael Hust
Journal:  PLoS Negl Trop Dis       Date:  2019-01-24

5.  Pyruvate dehydrogenase complex-enzyme 2, a new target for Listeria spp. detection identified using combined phage display technologies.

Authors:  Gustavo Marçal Schmidt Garcia Moreira; Sarah Mara Stella Köllner; Saskia Helmsing; Lothar Jänsch; Anja Meier; Sabine Gronow; Christian Boedeker; Stefan Dübel; Marcelo Mendonça; Ângela Nunes Moreira; Fabricio Rochedo Conceição; Michael Hust
Journal:  Sci Rep       Date:  2020-09-17       Impact factor: 4.379

  5 in total

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