Literature DB >> 29113256

NUDT expression is predictive of prognosis in patients with clear cell renal cell carcinoma.

Yue Wang1,2, Fangning Wan1,2, Kun Chang1,2, Xiaolin Lu1,2, Bo Dai1,2, Dingwei Ye1,2.   

Abstract

The nudix hydroxylase (NUDT) family of genes may have notable roles in cancer growth and metastasis. The present study aimed to determine the prognostic ability of NUDT genes in clear cell renal cell carcinoma (ccRCC). Data from 509 patients with ccRCC was obtained from The Cancer Genome Atlas (TCGA) database and 192 patient samples from Fudan University Shanghai Cancer Center (FUSCC) were analyzed in the present study. The expression profile of NUDT gene family members in the TCGA cohort was obtained from the TCGA RNA sequencing database. Pathological characteristics, including age, sex, tumor size, tumor grade, stage, laterality and overall survival were collected. Cox proportional hazards regression model and Kaplan-Meier survival analysis were performed to assess the associations between pathological characteristics and expression levels of NUDT family genes. NUDT family genes that exhibited associations with overall survival (OS) were further validated in the FUSCC cohort. In the TCGA cohort, Cox proportional hazards analysis found that NUDT5 [hazards ratio (HR)=1.676; 95% confidence interval (CI), 1.097-2.559] and NUDT17 (HR=1.375; 95% CI, 1.092-1.732) were predictive of ccRCC prognosis. Further analysis revealed that low NUDT5 (P<0.0001) and NUDT17 (P<0.0001) expression were associated with poorer OS rates in the TCGA cohort. In the FUSCC cohort, low NUDT5 expression was also associated with poor OS rates (P=0.0116), and tumor grade was a factor that influenced the expression level of NUDT5 (P=0.016).

Entities:  

Keywords:  clear cell renal cell carcinoma; nudix hydroxylase family; prognosis

Year:  2017        PMID: 29113256      PMCID: PMC5661574          DOI: 10.3892/ol.2017.6997

Source DB:  PubMed          Journal:  Oncol Lett        ISSN: 1792-1074            Impact factor:   2.967


  32 in total

Review 1.  The MutT proteins or "Nudix" hydrolases, a family of versatile, widely distributed, "housecleaning" enzymes.

Authors:  M J Bessman; D N Frick; S F O'Handley
Journal:  J Biol Chem       Date:  1996-10-11       Impact factor: 5.157

2.  Analysis of the oxidative damage repair genes NUDT1, OGG1, and MUTYH in patients from mismatch repair proficient HNPCC families (MSS-HNPCC).

Authors:  Pilar Garre; Verónica Briceño; Rosa M Xicola; Brian J Doyle; Miguel de la Hoya; Julián Sanz; Patricia Llovet; Paula Pescador; Javier Puente; Eduardo Díaz-Rubio; Xavier Llor; Trinidad Caldés
Journal:  Clin Cancer Res       Date:  2011-02-25       Impact factor: 12.531

3.  Multiple enzyme activities of Escherichia coli MutT protein for sanitization of DNA and RNA precursor pools.

Authors:  Riyoko Ito; Hiroshi Hayakawa; Mutsuo Sekiguchi; Toru Ishibashi
Journal:  Biochemistry       Date:  2005-05-03       Impact factor: 3.162

4.  hNUDT16: a universal decapping enzyme for small nucleolar RNA and cytoplasmic mRNA.

Authors:  Guangwen Lu; Jie Zhang; Yan Li; Zhixin Li; Na Zhang; Xiang Xu; Tingting Wang; Zhenhong Guan; George F Gao; Jinghua Yan
Journal:  Protein Cell       Date:  2011-02-20       Impact factor: 14.870

5.  The oxidized forms of dATP are substrates for the human MutT homologue, the hMTH1 protein.

Authors:  K Fujikawa; H Kamiya; H Yakushiji; Y Fujii; Y Nakabeppu; H Kasai
Journal:  J Biol Chem       Date:  1999-06-25       Impact factor: 5.157

6.  A novel context for the 'MutT' module, a guardian of cell integrity, in a diphosphoinositol polyphosphate phosphohydrolase.

Authors:  S T Safrany; J J Caffrey; X Yang; M E Bembenek; M B Moyer; W A Burkhart; S B Shears
Journal:  EMBO J       Date:  1998-11-16       Impact factor: 11.598

7.  Probing the substrate recognition mechanism of the human MTH1 protein by nucleotide analogs.

Authors:  Hiroyuki Kamiya; Hiroyuki Yakushiji; Laurence Dugué; Mitsuhide Tanimoto; Sylvie Pochet; Yusaku Nakabeppu; Hideyoshi Harashima
Journal:  J Mol Biol       Date:  2004-02-27       Impact factor: 5.469

Review 8.  Epidemiology and staging of renal cell carcinoma.

Authors:  Carole A Ridge; Bradley B Pua; David C Madoff
Journal:  Semin Intervent Radiol       Date:  2014-03       Impact factor: 1.513

9.  NUDT16 and ITPA play a dual protective role in maintaining chromosome stability and cell growth by eliminating dIDP/IDP and dITP/ITP from nucleotide pools in mammals.

Authors:  Nona Abolhassani; Teruaki Iyama; Daisuke Tsuchimoto; Kunihiko Sakumi; Mizuki Ohno; Mehrdad Behmanesh; Yusaku Nakabeppu
Journal:  Nucleic Acids Res       Date:  2010-01-15       Impact factor: 16.971

10.  Characterization of a nudix hydrolase from Deinococcus radiodurans with a marked specificity for (deoxy)ribonucleoside 5'-diphosphates.

Authors:  David I Fisher; Jared L Cartwright; Hideyoshi Harashima; Hiroyuki Kamiya; Alexander G McLennan
Journal:  BMC Biochem       Date:  2004-05-17       Impact factor: 4.059

View more
  6 in total

1.  High CHD9 expression is associated with poor prognosis in clear cell renal cell carcinoma.

Authors:  Bo Guan; Xian-Gui Ran; Yong-Qiang Du; Feng Ren; Ye Tian; Ying Wang; Ming-Min Chen
Journal:  Int J Clin Exp Pathol       Date:  2018-07-01

2.  SMARCC1 expression is positively correlated with pathological grade and good prognosis in renal cell carcinoma.

Authors:  Gangmin Wang; Qi Lv; Chunhui Ma; Yinan Zhang; Haoming Li; Qiang Ding
Journal:  Transl Androl Urol       Date:  2021-01

Review 3.  Role of the NUDT Enzymes in Breast Cancer.

Authors:  Roni H G Wright; Miguel Beato
Journal:  Int J Mol Sci       Date:  2021-02-25       Impact factor: 5.923

4.  A novel prognostic 7-methylguanosine signature reflects immune microenvironment and alternative splicing in glioma based on multi-omics analysis.

Authors:  Zihan Wang; Zhiwei Zhong; Zehua Jiang; Zepeng Chen; Yuequn Chen; Yimin Xu
Journal:  Front Cell Dev Biol       Date:  2022-08-10

5.  The high expression of MTH1 and NUDT5 predict a poor survival and are associated with malignancy of esophageal squamous cell carcinoma.

Authors:  Jing-Jing Wang; Teng-Hui Liu; Jin Li; Dan-Ni Li; Xin-Yuan Tian; Qiu-Geng Ouyang; Jian-Ping Cai
Journal:  PeerJ       Date:  2020-05-26       Impact factor: 2.984

6.  Clinical correlations and prognostic value of Nudix hydroxylase 10 in patients with gastric cancer.

Authors:  Diqun Chen; Rouxin Zhang; Aosi Xie; Jinpeng Yuan; Jinhai Zhang; Yongjian Huang; Hongxia Zhang; Feiran Zhang
Journal:  Bioengineered       Date:  2021-12       Impact factor: 3.269

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.