Literature DB >> 29111685

Thermal Shift as an Entropy-Driven Effect.

Martin Redhead1, Rupert Satchell1, Ciara McCarthy1, Scott Pollack1, John Unitt1.   

Abstract

Thermal shift assays (TSAs) are among the most commonly used biophysical approaches in drug discovery in both academic and industrial settings. However, the most common interpretation of the data generated by a TSA is purely qualitative, using only the change in melting temperature (ΔTm) as a metric. This has left many questions surrounding the interpretation of the data as well as whether the TSA truly correlates with other assays. TSAs also lack theoretical descriptions of the melt behavior of proteins in the presence of multiple ligands. Here we describe a novel simplified analytical framework based on "pseudoisothermal" models as well as exact thermodynamic descriptions of protein-ligand melt behavior rooted in changes in the entropy of melting. We show how the models are broad and independently applicable, in that they can describe the behavior of any macromolecule such as a protein or DNA and demonstrate good correlations with other techniques. These models are shown to give good descriptions of assay systems containing single or multiple ligands and can determine the mechanism of interaction. The models are derived from first principles, and the theoretical justification is discussed.

Mesh:

Substances:

Year:  2017        PMID: 29111685     DOI: 10.1021/acs.biochem.7b00860

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  4 in total

1.  Stabilization of G-Quadruplex-Duplex Hybrid Structures Induced by Minor Groove-Binding Drugs.

Authors:  Lily Scott; Tigran V Chalikian
Journal:  Life (Basel)       Date:  2022-04-18

2.  The crystallization additive hexatungstotellurate promotes the crystallization of the HSP70 nucleotide binding domain into two different crystal forms.

Authors:  Aengus Mac Sweeney; Alain Chambovey; Micha Wicki; Manon Müller; Nadia Artico; Roland Lange; Aleksandar Bijelic; Joscha Breibeck; Annette Rompel
Journal:  PLoS One       Date:  2018-06-27       Impact factor: 3.240

3.  POT1 stability and binding measured by fluorescence thermal shift assays.

Authors:  Lynn W DeLeeuw; Robert C Monsen; Vytautas Petrauskas; Robert D Gray; Lina Baranauskiene; Daumantas Matulis; John O Trent; Jonathan B Chaires
Journal:  PLoS One       Date:  2021-03-30       Impact factor: 3.240

Review 4.  Biophysical methods in early drug discovery.

Authors:  Geoffrey Holdgate; Kevin Embrey; Alexander Milbradt; Gareth Davies
Journal:  ADMET DMPK       Date:  2019-12-11
  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.