Literature DB >> 29110294

Chemometric Methods to Quantify 1D and 2D NMR Spectral Differences Among Similar Protein Therapeutics.

Kang Chen1, Junyong Park2, Feng Li2, Sharadrao M Patil3, David A Keire4.   

Abstract

NMR spectroscopy is an emerging analytical tool for measuring complex drug product qualities, e.g., protein higher order structure (HOS) or heparin chemical composition. Most drug NMR spectra have been visually analyzed; however, NMR spectra are inherently quantitative and multivariate and thus suitable for chemometric analysis. Therefore, quantitative measurements derived from chemometric comparisons between spectra could be a key step in establishing acceptance criteria for a new generic drug or a new batch after manufacture change. To measure the capability of chemometric methods to differentiate comparator NMR spectra, we calculated inter-spectra difference metrics on 1D/2D spectra of two insulin drugs, Humulin R® and Novolin R®, from different manufacturers. Both insulin drugs have an identical drug substance but differ in formulation. Chemometric methods (i.e., principal component analysis (PCA), 3-way Tucker3 or graph invariant (GI)) were performed to calculate Mahalanobis distance (D M) between the two brands (inter-brand) and distance ratio (D R) among the different lots (intra-brand). The PCA on 1D inter-brand spectral comparison yielded a D M value of 213. In comparing 2D spectra, the Tucker3 analysis yielded the highest differentiability value (D M = 305) in the comparisons made followed by PCA (D M = 255) then the GI method (D M = 40). In conclusion, drug quality comparisons among different lots might benefit from PCA on 1D spectra for rapidly comparing many samples, while higher resolution but more time-consuming 2D-NMR-data-based comparisons using Tucker3 analysis or PCA provide a greater level of assurance for drug structural similarity evaluation between drug brands.

Entities:  

Keywords:  Mahalanobis distance; PCA; Tucker3; distance ratio; graph invariant

Mesh:

Substances:

Year:  2017        PMID: 29110294      PMCID: PMC6995279          DOI: 10.1208/s12249-017-0911-1

Source DB:  PubMed          Journal:  AAPS PharmSciTech        ISSN: 1530-9932            Impact factor:   3.246


  29 in total

1.  Marketplace Analysis of Conjugated Estrogens: Determining the Consistently Present Steroidal Content with LC-MS.

Authors:  Michaella J Levy; Michael T Boyne; Sarah Rogstad; David J Skanchy; Xiaohui Jiang; Ilan Geerlof-Vidavsky
Journal:  AAPS J       Date:  2015-08-05       Impact factor: 4.009

2.  Profiling formulated monoclonal antibodies by (1)H NMR spectroscopy.

Authors:  Leszek Poppe; John B Jordan; Ken Lawson; Matthew Jerums; Izydor Apostol; Paul D Schnier
Journal:  Anal Chem       Date:  2013-09-24       Impact factor: 6.986

3.  Mapping monoclonal antibody structure by 2D 13C NMR at natural abundance.

Authors:  Luke W Arbogast; Robert G Brinson; John P Marino
Journal:  Anal Chem       Date:  2015-03-09       Impact factor: 6.986

4.  NMR profiling of biomolecules at natural abundance using 2D 1H-15N and 1H-13C multiplicity-separated (MS) HSQC spectra.

Authors:  Kang Chen; Darón I Freedberg; David A Keire
Journal:  J Magn Reson       Date:  2014-12-04       Impact factor: 2.229

Review 5.  Post-translational structural modifications of immunoglobulin G and their effect on biological activity.

Authors:  Laura K Hmiel; Kurt A Brorson; Michael T Boyne
Journal:  Anal Bioanal Chem       Date:  2014-09-10       Impact factor: 4.142

6.  Heteronuclear NMR as a 4-in-1 analytical platform for detecting modification-specific signatures of therapeutic insulin formulations.

Authors:  Xing Jin; Sunmi Kang; Hyuknam Kwon; Sunghyouk Park
Journal:  Anal Chem       Date:  2014-02-05       Impact factor: 6.986

7.  Flexibility and bioactivity of insulin: an NMR investigation of the solution structure and folding of an unusually flexible human insulin mutant with increased biological activity.

Authors:  D Keller; R Clausen; K Josefsen; J J Led
Journal:  Biochemistry       Date:  2001-09-04       Impact factor: 3.162

8.  Differentiation of generic enoxaparins marketed in the United States by employing NMR and multivariate analysis.

Authors:  Marco Guerrini; Timothy R Rudd; Lucio Mauri; Eleonora Macchi; Jawed Fareed; Edwin A Yates; Annamaria Naggi; Giangiacomo Torri
Journal:  Anal Chem       Date:  2015-08-06       Impact factor: 6.986

9.  Comparison of NMR and Dynamic Light Scattering for Measuring Diffusion Coefficients of Formulated Insulin: Implications for Particle Size Distribution Measurements in Drug Products.

Authors:  Sharadrao M Patil; David A Keire; Kang Chen
Journal:  AAPS J       Date:  2017-08-08       Impact factor: 4.009

10.  Assessment of the three-dimensional structure of recombinant protein therapeutics by NMR fingerprinting: demonstration on recombinant human granulocyte macrophage-colony stimulation factor.

Authors:  Yves Aubin; Geneviève Gingras; Simon Sauvé
Journal:  Anal Chem       Date:  2008-03-06       Impact factor: 6.986

View more
  5 in total

1.  Comparative Analysis of One-Dimensional Protein Fingerprint by Line Shape Enhancement and Two-Dimensional 1H,13C Methyl NMR Methods for Characterization of the Higher Order Structure of IgG1 Monoclonal Antibodies.

Authors:  Korth W Elliott; Houman Ghasriani; Mats Wikström; John P Giddens; Yves Aubin; Frank Delaglio; John P Marino; Luke W Arbogast
Journal:  Anal Chem       Date:  2020-04-14       Impact factor: 6.986

2.  Assessment of the Higher-Order Structure of Formulated Monoclonal Antibody Therapeutics by 2D Methyl Correlated NMR and Principal Component Analysis.

Authors:  Luke W Arbogast; Frank Delaglio; Robert G Brinson; John P Marino
Journal:  Curr Protoc Protein Sci       Date:  2020-06

3.  Platform development for expression and purification of stable isotope labeled monoclonal antibodies in Escherichia coli.

Authors:  Prasad T Reddy; Robert G Brinson; J Todd Hoopes; Colleen McClung; Na Ke; Lila Kashi; Mehmet Berkmen; Zvi Kelman
Journal:  MAbs       Date:  2018-07-30       Impact factor: 5.857

Review 4.  Analytical Similarity Assessment of Biosimilars: Global Regulatory Landscape, Recent Studies and Major Advancements in Orthogonal Platforms.

Authors:  Neh Nupur; Srishti Joshi; Davy Gulliarme; Anurag S Rathore
Journal:  Front Bioeng Biotechnol       Date:  2022-02-09

Review 5.  The metaRbolomics Toolbox in Bioconductor and beyond.

Authors:  Jan Stanstrup; Corey D Broeckling; Rick Helmus; Nils Hoffmann; Ewy Mathé; Thomas Naake; Luca Nicolotti; Kristian Peters; Johannes Rainer; Reza M Salek; Tobias Schulze; Emma L Schymanski; Michael A Stravs; Etienne A Thévenot; Hendrik Treutler; Ralf J M Weber; Egon Willighagen; Michael Witting; Steffen Neumann
Journal:  Metabolites       Date:  2019-09-23
  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.