Literature DB >> 29109145

Jumpstarting the cytochrome P450 catalytic cycle with a hydrated electron.

Huriye Erdogan1, An Vandemeulebroucke2, Thomas Nauser1, Patricia L Bounds1, Willem H Koppenol3.   

Abstract

Cytochrome P450cam (CYP101Fe3+) regioselectively hydroxylates camphor. Possible hydroxylating intermediates in the catalytic cycle of this well-characterized enzyme have been proposed on the basis of experiments carried out at very low temperatures and shunt reactions, but their presence has not yet been validated at temperatures above 0 °C during a normal catalytic cycle. Here, we demonstrate that it is possible to mimic the natural catalytic cycle of CYP101Fe3+ by using pulse radiolysis to rapidly supply the second electron of the catalytic cycle to camphor-bound CYP101[FeO2]2+ Judging by the appearance of an absorbance maximum at 440 nm, we conclude that CYP101[FeOOH]2+ (compound 0) accumulates within 5 μs and decays rapidly to CYP101Fe3+, with a k440 nm of 9.6 × 104 s-1 All processes are complete within 40 μs at 4 °C. Importantly, no transient absorbance bands could be assigned to CYP101[FeO2+por•+] (compound 1) or CYP101[FeO2+] (compound 2). However, indirect evidence for the involvement of compound 1 was obtained from the kinetics of formation and decay of a tyrosyl radical. 5-Hydroxycamphor was formed quantitatively, and the catalytic activity of the enzyme was not impaired by exposure to radiation during the pulse radiolysis experiment. The rapid decay of compound 0 enabled calculation of the limits for the Gibbs activation energies for the conversions of compound 0 → compound 1 → compound 2 → CYP101Fe3+, yielding a ΔG‡ of 45, 39, and 39 kJ/mol, respectively. At 37 °C, the steps from compound 0 to the iron(III) state would take only 4 μs. Our kinetics studies at 4 °C complement the canonical mechanism by adding the dimension of time.
© 2017 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  cytochrome P450; electron transfer; isotope effect; kinetics; oxidation-reduction (redox)

Mesh:

Substances:

Year:  2017        PMID: 29109145      PMCID: PMC5766938          DOI: 10.1074/jbc.M117.813683

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  36 in total

1.  Cytochrome P450 compound I: capture, characterization, and C-H bond activation kinetics.

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2.  Kinetic consequences of introducing a proximal selenocysteine ligand into cytochrome P450cam.

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3.  Chemical nature of the secondary hydrogen peroxide compound formed by cytochrome-c peroxidase and horseradish peroxidase.

Authors:  P GEORGE
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Review 4.  P450 enzymes: their structure, reactivity, and selectivity-modeled by QM/MM calculations.

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Journal:  Chem Rev       Date:  2010-02-10       Impact factor: 60.622

5.  Crystallographic study on the dioxygen complex of wild-type and mutant cytochrome P450cam. Implications for the dioxygen activation mechanism.

Authors:  Shingo Nagano; Thomas L Poulos
Journal:  J Biol Chem       Date:  2005-06-30       Impact factor: 5.157

6.  Aliphatic hydroxylation by highly purified liver microsomal cytochrome P-450. Evidence for a carbon radical intermediate.

Authors:  J T Groves; G A McClusky
Journal:  Biochem Biophys Res Commun       Date:  1978-03-15       Impact factor: 3.575

7.  Rate constants of hydrated electron reactions with amino acids.

Authors:  R Braams
Journal:  Radiat Res       Date:  1966-03       Impact factor: 2.841

Review 8.  Hydrocarbon hydroxylation by cytochrome P450 enzymes.

Authors:  Paul R Ortiz de Montellano
Journal:  Chem Rev       Date:  2010-02-10       Impact factor: 60.622

9.  Kinetics and activation parameters for oxidations of styrene by Compounds I from the cytochrome P450(BM-3) (CYP102A1) heme domain and from CYP119.

Authors:  Xinting Yuan; Qin Wang; John H Horner; Xin Sheng; Martin Newcomb
Journal:  Biochemistry       Date:  2009-09-29       Impact factor: 3.162

10.  A case study of the mechanism of alcohol-mediated Morita Baylis-Hillman reactions. The importance of experimental observations.

Authors:  R Erik Plata; Daniel A Singleton
Journal:  J Am Chem Soc       Date:  2015-03-13       Impact factor: 15.419

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  2 in total

Review 1.  Formation and Cleavage of C-C Bonds by Enzymatic Oxidation-Reduction Reactions.

Authors:  F Peter Guengerich; Francis K Yoshimoto
Journal:  Chem Rev       Date:  2018-06-22       Impact factor: 60.622

2.  CYP2C9, a Metabolic CYP450s Enzyme, Plays Critical Roles in Activating Ellagic Acid in Human Intestinal Epithelial Cells.

Authors:  Yang Gu; Wei Hou; Xin-Yu Shen; Shi-Xuan Zhuo; Hao-Ran Zhang; Ming-Hui Ji; Mei-Juan Chen; Yuan-Yuan Guo
Journal:  Med Sci Monit       Date:  2020-05-26
  2 in total

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