Literature DB >> 29107822

Molecular architectures and mechanisms of Class 2 CRISPR-associated nucleases.

Carmela Garcia-Doval1, Martin Jinek2.   

Abstract

Prokaryotic Class 2 CRISPR-Cas systems mediate adaptive immunity against invasive genetic elements by means of standalone effector proteins that function as RNA-guided nucleases. The effectors Cas9 and Cas12 generate double-strand breaks in DNA substrates, which has been exploited for genome editing applications. In turn, Cas13 enzymes function as RNA-guided ribonucleases whose non-specific activity is triggered by target RNA binding. In this review, we highlight recent structural investigations of Cas9, Cas12 and Cas13 nucleases that have illuminated many aspects of their molecular mechanisms. In particular, these studies have highlighted the role of guide RNA seed sequences in facilitating target recognition and the importance of conformational transitions in controlling target binding and cleavage.
Copyright © 2017 Elsevier Ltd. All rights reserved.

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Year:  2017        PMID: 29107822     DOI: 10.1016/j.sbi.2017.10.015

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  18 in total

Review 1.  Structure-based functional mechanisms and biotechnology applications of anti-CRISPR proteins.

Authors:  Ning Jia; Dinshaw J Patel
Journal:  Nat Rev Mol Cell Biol       Date:  2021-06-04       Impact factor: 94.444

Review 2.  Stem cell-based therapies for Duchenne muscular dystrophy.

Authors:  Congshan Sun; Carlo Serra; Gabsang Lee; Kathryn R Wagner
Journal:  Exp Neurol       Date:  2019-10-19       Impact factor: 5.330

3.  Directed evolution studies of a thermophilic Type II-C Cas9.

Authors:  Travis H Hand; Anuska Das; Hong Li
Journal:  Methods Enzymol       Date:  2018-12-28       Impact factor: 1.600

4.  Optimization of specific RNA knockdown in mammalian cells with CRISPR-Cas13.

Authors:  Brandon Joseph Davis Burris; Adrian Moises Molina Vargas; Brandon J Park; Mitchell R O'Connell
Journal:  Methods       Date:  2022-08-17       Impact factor: 4.647

Review 5.  PROTACs: great opportunities for academia and industry (an update from 2020 to 2021).

Authors:  Ming He; Chaoguo Cao; Zhihao Ni; Yongbo Liu; Peilu Song; Shuang Hao; Yuna He; Xiuyun Sun; Yu Rao
Journal:  Signal Transduct Target Ther       Date:  2022-06-09

Review 6.  CRISPR-Based Genome Editing: Advancements and Opportunities for Rice Improvement.

Authors:  Workie Anley Zegeye; Mesfin Tsegaw; Yingxin Zhang; Liyong Cao
Journal:  Int J Mol Sci       Date:  2022-04-18       Impact factor: 6.208

7.  Phosphate Lock Residues of Acidothermus cellulolyticus Cas9 Are Critical to Its Substrate Specificity.

Authors:  Travis H Hand; Anuska Das; Mitchell O Roth; Chardasia L Smith; Uriel L Jean-Baptiste; Hong Li
Journal:  ACS Synth Biol       Date:  2018-12-03       Impact factor: 5.110

8.  Structural Basis for the RNA-Guided Ribonuclease Activity of CRISPR-Cas13d.

Authors:  Cheng Zhang; Silvana Konermann; Nicholas J Brideau; Peter Lotfy; Xuebing Wu; Scott J Novick; Timothy Strutzenberg; Patrick R Griffin; Patrick D Hsu; Dmitry Lyumkis
Journal:  Cell       Date:  2018-09-20       Impact factor: 41.582

Review 9.  HEPN RNases - an emerging class of functionally distinct RNA processing and degradation enzymes.

Authors:  Monica C Pillon; Jacob Gordon; Meredith N Frazier; Robin E Stanley
Journal:  Crit Rev Biochem Mol Biol       Date:  2020-12-22       Impact factor: 8.250

Review 10.  The Regulation of RNA Modification Systems: The Next Frontier in Epitranscriptomics?

Authors:  Matthias R Schaefer
Journal:  Genes (Basel)       Date:  2021-02-26       Impact factor: 4.096

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