Literature DB >> 29106587

Tracking and responding to an outbreak of tuberculosis using MIRU-VNTR genotyping and whole genome sequencing as epidemiological tools.

Anne T Black1, Esther L Hamblion2, Helen Buttivant3, Sarah R Anderson2, Madeline Stone4, Nicola Casali4, Francis Drobniewski4, Francisca Nwoguh5, Ben G Marshall6, Linda Booth1.   

Abstract

Background: We describe an outbreak that contributed to a near doubling of the incidence of tuberculosis in Southampton, UK. We examine the importance of 24 locus mycobacterial interspersed repetitive unit variable number tandem repeat (MIRU-VNTR) genotyping in its identification and management and the role of whole genome sequencing (WGS) in tracing the spread of the strain.
Methods: Outbreak cases were defined as those diagnosed between January and December 2011 with indistinguishable 24 locus-MIRU-VNTR genotypes or, cases linked epidemiologically. A cluster questionnaire was administered by TB nurses to identify contacts and social settings.
Results: Overall, 25 patients fulfilled the case definition. No cases with this MIRU-VNTR genotype had been detected in the UK previously. Connections were found between all cases through household contacts or social venues including a football club, Internet cafe and barber's shop. Public health actions included extended contact tracing, venue screening and TB awareness-raising. The outbreak resulted in a high rate of transmission and high incidence of clinical disease among contacts. Conclusions: This outbreak illustrates the value of combining active case-finding with prospective MIRU-VNTR genotyping to identify settings to undertake public health action. In addition WGS revealed that the VNTR-defined cluster was a single outbreak and that active TB transmission not reactivation was responsible for this outbreak in non-UK born individuals.

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Year:  2018        PMID: 29106587     DOI: 10.1093/pubmed/fdx075

Source DB:  PubMed          Journal:  J Public Health (Oxf)        ISSN: 1741-3842            Impact factor:   2.341


  9 in total

Review 1.  Tuberculosis in Adolescents and Young Adults: Emerging Data on TB Transmission and Prevention among Vulnerable Young People.

Authors:  Katherine M Laycock; Leslie A Enane; Andrew P Steenhoff
Journal:  Trop Med Infect Dis       Date:  2021-08-05

2.  Developing National Genotype-Independent Indicators for Recent Mycobacterium Tuberculosis Transmission Using Pediatric Cases-United States, 2011-2017.

Authors:  Alexia V Harrist; Clinton J McDaniel; Jonathan M Wortham; Sandy P Althomsons
Journal:  Public Health Rep       Date:  2021-02-19       Impact factor: 2.792

3.  Creating a web-based electronic tool to aid tuberculosis (TB) cluster investigation: data integration in TB surveillance activities in the United Kingdom, 2013 to 2016.

Authors:  Jennifer A Davidson; Laura F Anderson; Victoria Adebisi; Leonardo de Jongh; Andy Burkitt; Maeve K Lalor
Journal:  Euro Surveill       Date:  2018-11

4.  A tuberculosis school outbreak in China, 2018: reaching an often overlooked adolescent population.

Authors:  N N You; L M Zhu; G L Li; L Martinez; W Lu; Q Liu; H T Yang
Journal:  Epidemiol Infect       Date:  2019-11-18       Impact factor: 2.451

5.  High genetic diversity among Mycobacterium tuberculosis strains in Tehran, Iran.

Authors:  Taher Azimi; Mohammad Javad Nasiri; Samin Zamani; Ali Hashemi; Hossein Goudarzi; Abbas Ali Imani Fooladi; Mohammad Mehdi Feizabadi; Fatemeh Fallah
Journal:  J Clin Tuberc Other Mycobact Dis       Date:  2018-01-31

6.  Comparison of routine field epidemiology and whole genome sequencing to identify tuberculosis transmission in a remote setting.

Authors:  J L Guthrie; L Strudwick; B Roberts; M Allen; J McFadzen; D Roth; D Jorgensen; M Rodrigues; P Tang; B Hanley; J Johnston; V J Cook; J L Gardy
Journal:  Epidemiol Infect       Date:  2020-02-04       Impact factor: 2.451

7.  High rate of transmission in a pulmonary tuberculosis outbreak in a junior high school in China, 2020.

Authors:  Peng Lu; Feng Lu; Qiao Liu; Ling Tang; Xiaoyan Ding; Wen Kong; Wei Lu; Limei Zhu
Journal:  IJID Reg       Date:  2021-11-03

8.  Mycobacterium simiae pulmonary disease in Iran: systematic review and meta-analysis.

Authors:  M J Nasiri; M Heidary; T Azimi; H Goudarzi; P Tabarsi; D D Sarokhalil; M M Feizabadi
Journal:  New Microbes New Infect       Date:  2018-09-22

9.  Whole-Genome Sequencing as Tool for Investigating International Tuberculosis Outbreaks: A Systematic Review.

Authors:  Marieke J van der Werf; Csaba Ködmön
Journal:  Front Public Health       Date:  2019-04-17
  9 in total

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