Literature DB >> 29106321

A global function for transcription factors in assisting RNA polymerase II termination.

Kevin Roy1, Guillaume F Chanfreau1.   

Abstract

The role of transcription factors (TFs) on nucleosome positioning, RNA polymerase recruitment, and transcription initiation has been extensively characterized. Here, we propose that a subset of TFs such as Reb1, Abf1, Rap1, and TFIIIB also serve a major function in partitioning transcription units by assisting the Nrd1p-Nab3p-Sen1p Pol II termination pathway.

Entities:  

Keywords:  GRFs; Nab3; Nrd1; Reb1; Sen1; TFIIIB; Transcription termination; exosome

Mesh：

Substances：

Year:  2017        PMID： 29106321      PMCID： PMC5791854          DOI： 10.1080/21541264.2017.1300121

Source DB:  PubMed          Journal:  Transcription        ISSN： 2154-1272


  30 in total

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3.  Nucleosome Stability Distinguishes Two Different Promoter Types at All Protein-Coding Genes in Yeast.

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4.  Genomic Nucleosome Organization Reconstituted with Pure Proteins.

Authors:  Nils Krietenstein; Megha Wal; Shinya Watanabe; Bongsoo Park; Craig L Peterson; B Franklin Pugh; Philipp Korber
Journal:  Cell       Date:  2016-10-20       Impact factor: 41.582

5.  Intrinsic coupling of lagging-strand synthesis to chromatin assembly.

Authors:  Duncan J Smith; Iestyn Whitehouse
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6.  Transcriptome surveillance by selective termination of noncoding RNA synthesis.

Authors:  Daniel Schulz; Bjoern Schwalb; Anja Kiesel; Carlo Baejen; Phillipp Torkler; Julien Gagneur; Johannes Soeding; Patrick Cramer
Journal:  Cell       Date:  2013-11-07       Impact factor: 41.582

7.  Global analysis of protein expression in yeast.

Authors:  Sina Ghaemmaghami; Won-Ki Huh; Kiowa Bower; Russell W Howson; Archana Belle; Noah Dephoure; Erin K O'Shea; Jonathan S Weissman
Journal:  Nature       Date:  2003-10-16       Impact factor: 49.962

8.  Genome-wide analysis of transcriptional dependence and probable target sites for Abf1 and Rap1 in Saccharomyces cerevisiae.

Authors:  Arunadevi Yarragudi; Laura Wegener Parfrey; Randall H Morse
Journal:  Nucleic Acids Res       Date:  2006-12-07       Impact factor: 16.971

9.  Genome-wide mapping of yeast RNA polymerase II termination.

Authors:  Paul Schaughency; Jonathan Merran; Jeffry L Corden
Journal:  PLoS Genet       Date:  2014-10-09       Impact factor: 5.917

10.  Common genomic elements promote transcriptional and DNA replication roadblocks.

Authors:  Kevin Roy; Jason Gabunilas; Abigail Gillespie; Duy Ngo; Guillaume F Chanfreau
Journal:  Genome Res       Date:  2016-08-18       Impact factor: 9.043
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  3 in total

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Review 2.  Beyond the canonical role of TFIIB in eukaryotic transcription.

Authors:  Michael J O'Brien; Athar Ansari
Journal:  Curr Genet       Date:  2021-11-19       Impact factor: 3.886

3.  Comparative Transcriptome Analyses of Different Rheum officinale Tissues Reveal Differentially Expressed Genes Associated with Anthraquinone, Catechin, and Gallic Acid Biosynthesis.

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  3 in total

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