Literature DB >> 29097879

Predicting disease Risk by Transformation Models in the Presence of Unspecified Subgroup Membership.

Qianqian Wang1, Yanyuan Ma1, Yuanjia Wang1.   

Abstract

Some biomedical studies lead to mixture data. When a discrete covariate defining subgroup membership is missing for some of the subjects in a study, the distribution of the outcome follows a mixture distribution of the subgroup-specific distributions. Taking into account the uncertain distribution of the group membership and the covariates, we model the relation between the disease onset time and the covariates through transformation models in each sub-population, and develop a nonparametric maximum likelihood based estimation implemented through EM algorithm along with its inference procedure. We further propose methods to identify the covariates that have different effects or common effects in distinct populations, which enables parsimonious modeling and better understanding of the difference across populations. The methods are illustrated through extensive simulation studies and a real data example.

Entities:  

Keywords:  Censored data; EM algorithm; Laplace transformation; mixed populations; semiparametric models; transformation models; uncertain population identifier

Year:  2017        PMID: 29097879      PMCID: PMC5662149          DOI: 10.5705/ss.202016.0199

Source DB:  PubMed          Journal:  Stat Sin        ISSN: 1017-0405            Impact factor:   1.261


  8 in total

1.  The kin-cohort study for estimating penetrance.

Authors:  S Wacholder; P Hartge; J P Struewing; D Pee; M McAdams; L Brody; M Tucker
Journal:  Am J Epidemiol       Date:  1998-10-01       Impact factor: 4.897

2.  Differences in duration of Huntington's disease based on age at onset.

Authors:  T Foroud; J Gray; J Ivashina; P M Conneally
Journal:  J Neurol Neurosurg Psychiatry       Date:  1999-01       Impact factor: 10.154

3.  A novel gene containing a trinucleotide repeat that is expanded and unstable on Huntington's disease chromosomes. The Huntington's Disease Collaborative Research Group.

Authors: 
Journal:  Cell       Date:  1993-03-26       Impact factor: 41.582

4.  Indexing disease progression at study entry with individuals at-risk for Huntington disease.

Authors:  Ying Zhang; Jeffrey D Long; James A Mills; John H Warner; Wenjing Lu; Jane S Paulsen
Journal:  Am J Med Genet B Neuropsychiatr Genet       Date:  2011-08-19       Impact factor: 3.568

5.  Nonparametric estimation for censored mixture data with application to the Cooperative Huntington's Observational Research Trial.

Authors:  Yuanjia Wang; Tanya P Garcia; Yanyuan Ma
Journal:  J Am Stat Assoc       Date:  2012       Impact factor: 5.033

6.  Latent subgroup analysis of a randomized clinical trial through a semiparametric accelerated failure time mixture model.

Authors:  L Altstein; G Li
Journal:  Biometrics       Date:  2013-02-05       Impact factor: 2.571

7.  A new model for prediction of the age of onset and penetrance for Huntington's disease based on CAG length.

Authors:  D R Langbehn; R R Brinkman; D Falush; J S Paulsen; M R Hayden
Journal:  Clin Genet       Date:  2004-04       Impact factor: 4.438

8.  Characterization of a large group of individuals with huntington disease and their relatives enrolled in the COHORT study.

Authors:  E Ray Dorsey
Journal:  PLoS One       Date:  2012-02-16       Impact factor: 3.240

  8 in total
  1 in total

1.  Dynamic landmark prediction for mixture data.

Authors:  Tanya P Garcia; Layla Parast
Journal:  Biostatistics       Date:  2021-07-17       Impact factor: 5.899

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.