| Literature DB >> 29088886 |
Can Qian1, Qinghua Zou1, Yong Wang1.
Abstract
OBJECTIVE: Present meta-analysis was performed to investigate the role of stromal cell-derived factor (SDF-1) gene rs1801157 polymorphism in systemic lupus erythematosus (SLE).Entities:
Keywords: SDF-1; SLE; meta-analysis; polymorphism
Year: 2017 PMID: 29088886 PMCID: PMC5650441 DOI: 10.18632/oncotarget.19766
Source DB: PubMed Journal: Oncotarget ISSN: 1949-2553
Figure 1Flow chart of study selection
A total of five eligible studies were included in the current meta-analysis.
Principal characteristics of the studies included in the meta-analysis
| First author | Year | Country | Ethnicity | Control source | Genotyping method | Case | Control | HWE | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lian | 2011 | Malaysia | Asian | PB | PCR-RFLP | 130 | 37 | 70 | 23 | 144 | 116 | 130 | 26 | 76 | 28 | 128 | 132 | 0.053 |
| Lima | 2007 | Mexico | Mexican Mestizo | PB | PCR-RFLP | 242 | 173 | 56 | 13 | 402 | 82 | 220 | 142 | 68 | 10 | 352 | 88 | 0.613 |
| Warchol | 2010 | Poland | Caucasian | PB | PCR-RFLP | 150 | 95 | 50 | 5 | 240 | 60 | 300 | 208 | 87 | 5 | 503 | 97 | 0.226 |
| Wu | 2012 | China | Asian | PB | PCR-RFLP | 422 | 253 | 146 | 23 | 652 | 192 | 374 | 197 | 160 | 17 | 554 | 194 | 0.028 |
| Ye | 2005 | China | Asian | PB | PCR-RFLP | 143 | 78 | 60 | 5 | 216 | 70 | 157 | 93 | 60 | 4 | 246 | 68 | 0.114 |
Notes: PCR-RFLP, polymerase chain reaction-restriction fragment length polymorphism; HWE, Hardy-Weinberg equilibrium.
SDF-1 rs1801157 polymorphism and SLE risk
| Genetic comparison | Group/Subgroup | OR (95%CI) | ||
|---|---|---|---|---|
| AA vs. GG | Ethnicity | Asian | 0.87 (0.55, 1.38) | 0.349 |
| Other* | 1.32 (0.65, 2.69) | 0.355 | ||
| Total | 0.99 (0.67, 1.45) | 0.413 | ||
| AA + GA vs. GG | Ethnicity | Asian | 0.81 (0.65, 1.01) | 0.131 |
| Other* | 0.96 (0.72, 1.27) | 0.043 | ||
| Total | 0.86 (0.73, 1.03) | 0.061 | ||
| AA vs. GG + GA | Ethnicity | Asian | 1.00 (0.66, 1.52) | 0.555 |
| Other* | 1.40 (0.69, 2.83) | 0.489 | ||
| Total | 1.09 (0.76, 1.56) | 0.675 | ||
| A vs. G | Ethnicity | Asian | 0.88 (0.74, 1.05) | 0.248 |
| Other* | 1.01 (0.79, 1.29) | 0.063 | ||
| Total | 0.92 (0.80, 1.06) | 0.133 | ||
| GA vs. GG | Ethnicity | Asian | 0.79 (0.63, 1.00) | 0.141 |
| Other* | 0.92 (0.68, 1.23) | 0.041 | ||
| Total | 0.84 (0.70, 1.00) | 0.070 | ||
Notes: *contains 1 study on Mexican Mestizo and 1 on Polish population. Ph, P-value of heterogeneity test.
Figure 2Forest plot of SLE risk associated with SDF-1 rs1801157 polymorphism under GA vs. GG model after stratification analysis by ethnicity
The squares and horizontal lines correspond to the study-specific OR and 95% CI. The area of the squares reflects the weight (inverse of the variance). The diamond represents the summary OR and 95% CI.
Figure 3Begg’s funnel plot for publication bias (under AA vs. GG model)
Each point represents a separate study for the indicated association. Log(OR), natural logarithm of OR. Horizontal line, mean effect size.