| Literature DB >> 29088792 |
Xiaobing Shen1, Pengfei Li1, Yuchao Xu1, Xiaowei Chen1, Haixiang Sun1, Ying Zhao1, Mengqi Liu1, Wenwen Zhang1.
Abstract
To evaluate the associations of sirtuins (SIRT1-7) with clinicopathological parameters in gastric cancer, sirtuins expression profile in NCBI GEO datasets, GSE62254 and GSE15459, was integrated and analyzed. The results suggested that SIRT4, SIRT6, and SIRT7 were associated with Lauren classification and SIRT3-5 were associated with pStage in gastric cancer. Then an online database derived from 1,065 gastric cancer cases, Kaplan-Meier plotter, was used to explore the associations of the mRNA levels of sirtuins with overall survival in gastric cancer. Survival curves generated from Kaplan-Meier plotter suggested that high expression of SIRT1 mRNA was favorable for overall survival in gastric cancer (SIRT1: HR = 0.64, 95% CI = 0.54-0.76, P = 2.2E-07), high expressions of SIRT2-4 and SIRT6-7 were poor for overall survival (SIRT2: HR = 2.31, 95% CI = 1.87-2.87, P = 3.6E-15; SIRT3: HR = 1.99, 95% CI = 1.62-2.45, P = 2.6E-11; SIRT4: HR = 1.41, 95% CI = 1.19-1.68, P = 6.6E-05; SIRT6: HR = 2.02, 95% CI = 1.66-2.47, P = 1.7E-12; SIRT7: HR = 1.96, 95% CI = 1.63-2.35, P = 2.7E-13), whereas no significant association existed between SIRT5 mRNA expression and overall survival. Further analyses stratified by gender, stages, Lauren classification, differentiation, treatment, and HER2 status were also performed. In summary, high SIRT1 mRNA level was associated with better overall survival, SIRT2-4 and 6-7 were associated with poor overall survival, whereas SIRT5 did not show significant association with overall survival in gastric cancer.Entities:
Keywords: gastric cancer; kaplan-meier plotter; overall survival; sirtuins
Year: 2017 PMID: 29088792 PMCID: PMC5650347 DOI: 10.18632/oncotarget.20799
Source DB: PubMed Journal: Oncotarget ISSN: 1949-2553
Sirtuins and clinicopathological parameters in patients with GC (GSE62254)
| Parameters | Cases | SIRT1+ | SIRT2+ | SIRT3+ | SIRT4+ | SIRT5+ | SIRT6+ | SIRT7+ |
|---|---|---|---|---|---|---|---|---|
| Male | 199 | 98 | 96 | 102 | 93 | 98 | 93 | 101 |
| Female | 101 | 52 | 54 | 48 | 57 | 52 | 57 | 49 |
| Age | ||||||||
| < 65 | 161 | 78 | 82 | 78 | 87 | 79 | 70* | 81 |
| ≥ 65 | 139 | 72 | 68 | 72 | 63 | 71 | 80 | 61 |
| Intestinal | 150 | 75 | 75 | 85 | 69 | 82 | 83 | 85* |
| Diffuse | 142 | 71 | 72 | 62 | 78 | 64 | 62 | 64 |
| Mixed | 8 | 4 | 3 | 3 | 3 | 4 | 5 | 1 |
| 2 | 188 | 88 | 93 | 105* | 93 | 104* | 100 | 102 |
| 3 | 91 | 49 | 47 | 34 | 50 | 36 | 38 | 37 |
| 4 | 21 | 13 | 10 | 11 | 7 | 10 | 12 | 11 |
| 0 | 38 | 20 | 19 | 18 | 16 | 19 | 24 | 10* |
| 1 | 131 | 58 | 60 | 63 | 72 | 71 | 65 | 75 |
| 2 | 80 | 46 | 43 | 44 | 42 | 42 | 33 | 42 |
| 3 | 51 | 26 | 28 | 25 | 20 | 18 | 28 | 23 |
| 0 | 273 | 139 | 133 | 138 | 139 | 137 | 143* | 133 |
| 1 | 27 | 11 | 17 | 12 | 11 | 13 | 7 | 17 |
| 1 | 30 | 14 | 14 | 17 | 11* | 15 | 22* | 8* |
| 2 | 97 | 42 | 46 | 50 | 56 | 55 | 49 | 57 |
| 3 | 96 | 53 | 49 | 47 | 52 | 49 | 42 | 47 |
| 4 | 77 | 41 | 41 | 36 | 77 | 31 | 37 | 38 |
*P < 0.05 demonstrated by Chi-square test.
Sirtuins and clinicopathological parameters in patients with GC (GSE15459)
| Parameter | Cases | SIRT1+ | SIRT2+ | SIRT3+ | SIRT4+ | SIRT5+ | SIRT6+ | SIRT7+ |
|---|---|---|---|---|---|---|---|---|
| Male | 125 | 63 | 67 | 65 | 66 | 59 | 66 | 63 |
| Female | 67 | 33 | 29 | 31 | 30 | 37 | 30 | 33 |
| < 65 | 84 | 42 | 38 | 47 | 40 | 41 | 45 | 42 |
| ≥ 65 | 108 | 54 | 58 | 49 | 56 | 55 | 51 | 54 |
| Intestinal | 99 | 43 | 49 | 43 | 50 | 49 | 54 | 60* |
| Diffuse | 75 | 42 | 39 | 45 | 41 | 38 | 33 | 28 |
| Mixed | 18 | 11 | 8 | 8 | 5 | 9 | 9 | 8 |
| 1 | 31 | 17 | 24* | 22* | 17 | 19 | 15 | 17 |
| 2 | 29 | 17 | 15 | 15 | 16 | 19 | 15 | 13 |
| 3 | 72 | 32 | 31 | 39 | 30 | 35 | 39 | 38 |
| 4 | 60 | 30 | 26 | 20 | 33 | 23 | 27 | 28 |
*P < 0.05 demonstrated by Chi-square test.
Sirtuins and clinicopathological parameters in patients with GC (integrated analysis of GSE62254 and GSE15459)
| Parameters | Cases | SIRT1+ | SIRT2+ | SIRT3+ | SIRT4+ | SIRT5+ | SIRT6+ | SIRT7+ |
|---|---|---|---|---|---|---|---|---|
| Male | 324 | 161 | 163 | 167 | 159 | 157 | 159 | 164 |
| Female | 168 | 85 | 83 | 79 | 87 | 89 | 87 | 82 |
| < 65 | 245 | 120 | 120 | 125 | 127 | 120 | 115 | 123 |
| ≥ 65 | 247 | 126 | 126 | 121 | 119 | 126 | 131 | 115 |
| Intestinal | 249 | 118 | 124 | 128 | 119* | 131 | 137* | 145* |
| Diffuse | 217 | 113 | 111 | 107 | 119 | 102 | 95 | 92 |
| Mixed | 26 | 15 | 11 | 11 | 8 | 13 | 14 | 9 |
| 1 | 61 | 31 | 38 | 39* | 28* | 34* | 37 | 25 |
| 2 | 126 | 59 | 61 | 65 | 72 | 74 | 64 | 70 |
| 3 | 168 | 85 | 80 | 86 | 82 | 84 | 81 | 85 |
| 4 | 137 | 71 | 67 | 56 | 110 | 54 | 64 | 66 |
*P < 0.05 demonstrated by Chi-square test.
Figure 1Correlations of sirtuins mRNA expressions with OS in all GC patients
(A) SIRT1 (n = 876). (B) SIRT2 (n = 876). (C) SIRT3 (n = 876). (D) SIRT4 (n = 876). (E) SIRT5 (n = 631). (F) SIRT6 (n = 836). (G) SIRT7 (n = 836).
Correlations of sirtuins with OS in GC in overall
| Sirtuins | Cases | HR | 95% CI | |
|---|---|---|---|---|
| SIRT1 | 876 | |||
| SIRT2 | 876 | |||
| SIRT3 | 876 | |||
| SIRT4 | 876 | |||
| SIRT5 | 631 | 1.14 | 0.92–1.42 | 2.3E-01 |
| SIRT6 | 876 | |||
| SIRT7 | 876 |
Correlations of sirtuins with OS in GC stratified by gender
| Sirtuins | Gender | Cases | HR | 95% CI | |
|---|---|---|---|---|---|
| SIRT1 | Male | 545 | |||
| Female | 236 | ||||
| SIRT2 | Male | 545 | |||
| Female | 236 | ||||
| SIRT3 | Male | 545 | |||
| Female | 236 | ||||
| SIRT4 | Male | 545 | |||
| Female | 236 | ||||
| SIRT5 | Male | 349 | 0.76 | 0.48–1.20 | 2.3E-01 |
| Female | 187 | 0.80 | 0.57–1.12 | 2.0E-01 | |
| SIRT6 | Male | 545 | |||
| Female | 236 | ||||
| SIRT7 | Male | 545 | |||
| Female | 236 |
Correlations of sirtuins with OS in GC stratified by stages
| Sirtuins | Stage | Cases | HR | 95% CI | |
|---|---|---|---|---|---|
| SIRT1 | 1 | 67 | 0.38 | 0.14–1.06 | 5.6E-02 |
| 2 | 140 | 1.55 | 0.78–3.06 | 2.1E-01 | |
| 3 | 305 | ||||
| 4 | 148 | 0.81 | 0.55–1.19 | 2.8E-01 | |
| SIRT2 | 1 | 67 | |||
| 2 | 140 | ||||
| 3 | 305 | ||||
| 4 | 148 | ||||
| SIRT3 | 1 | 67 | |||
| 2 | 140 | ||||
| 3 | 305 | ||||
| 4 | 148 | 0.76 | 0.50–1.14 | 1.8E-01 | |
| SIRT4 | 1 | 67 | 1.88 | 0.70–5.08 | 2.1E-01 |
| 2 | 140 | ||||
| 3 | 305 | ||||
| 4 | 148 | 1.32 | 0.89–1.97 | 1.6E-01 | |
| SIRT5 | 1 | 62 | 3.00 | 0.66–13.58 | 1.3E-01 |
| 2 | 135 | 1.91 | 0.91–4.03 | 8.1E-02 | |
| 3 | 197 | ||||
| 4 | 140 | ||||
| SIRT6 | 1 | 67 | 2.63 | 0.083–8.29 | 8.7E-02 |
| 2 | 140 | ||||
| 3 | 305 | ||||
| 4 | 148 | ||||
| SIRT7 | 1 | 67 | 2.76 | 0.94–8.08 | 5.4E-02 |
| 2 | 140 | ||||
| 3 | 305 | ||||
| 4 | 148 |
Correlations of sirtuins with OS in GC stratified by lauren classification
| Sirtuins | Lauren classification | Cases | HR | 95% CI | |
|---|---|---|---|---|---|
| SIRT1 | Intestinal | 320 | |||
| Diffuse | 141 | 1.26 | 0.88–1.81 | 2.1E-01 | |
| Mixed | 32 | 0.43 | 0.15–1.22 | 1.0E-01 | |
| SIRT2 | Intestinal | 320 | |||
| Diffuse | 141 | ||||
| Mixed | 32 | 2.02 | 0.57–7.23 | 2.7E-01 | |
| SIRT3 | Intestinal | 320 | |||
| Diffuse | 141 | ||||
| Mixed | 32 | ||||
| SIRT4 | Intestinal | 320 | |||
| Diffuse | 141 | ||||
| Mixed | 32 | 2.42 | 0.86–6.85 | 8.6E-02 | |
| SIRT5 | Intestinal | 169 | 1.32 | 0.90–1.93 | 1.5E-01 |
| Diffuse | 140 | 0.79 | 0.56–1.12 | 1.8E-01 | |
| Mixed | 29 | 0.37 | 0.11–1.20 | 8.4E-02 | |
| SIRT6 | Intestinal | 320 | |||
| Diffuse | 141 | 1.38 | 0.98–1.95 | 6.8E-02 | |
| Mixed | 32 | 2.31 | 0.77–6.94 | 1.2E-01 | |
| SIRT7 | Intestinal | 320 | |||
| Diffuse | 141 | 1.37 | 0.97–1.92 | 7.1E-02 | |
| Mixed | 32 | 2.40 | 0.83–6.95 | 9.7E-02 |
Correlations of sirtuins with OS in GC stratified by differentiation
| Sirtuins | Differentiation | Cases | HR | 95% CI | P-value |
|---|---|---|---|---|---|
| SIRT1 | Poor | 165 | 0.71 | 0.46–1.10 | 1.2E-01 |
| Moderate | 67 | 0.62 | 0.32–1.21 | 1.6E-01 | |
| Well | 32 | 0.50 | 0.19–1.30 | 1.5E-01 | |
| SIRT2 | Poor | 165 | 0.72 | 0.48–1.10 | 1.3E-01 |
| Moderate | 67 | 1.43 | 0.72–2.83 | 3.1E-01 | |
| Well | 32 | 0.44 | 0.15–1.31 | 1.3E-01 | |
| SIRT3 | Poor | 165 | 1.24 | 0.83–1.85 | 2.9E-01 |
| Moderate | 67 | ||||
| Well | 32 | ||||
| SIRT4 | Poor | 165 | |||
| Moderate | 67 | 0.56 | 0.27–1.14 | 1.0E-01 | |
| Well | 32 | 0.45 | 0.18–1.15 | 8.8E-02 | |
| SIRT5 | Poor | 121 | |||
| Moderate | 67 | 1.42 | 0.72–2.81 | 3.1E-01 | |
| Well | 5 | NA | |||
| SIRT6 | Poor | 165 | 0.75 | 0.49–1.12 | 1.6E-01 |
| Moderate | 67 | 1.75 | 0.9–3.42 | 9.5E-02 | |
| Well | 32 | 0.62 | 0.25–1.55 | 3.1E-01 | |
| SIRT7 | Poor | 165 | 1.37 | 0.88–2.12 | 1.6E-01 |
| Moderate | 67 | 1.61 | 0.67–3.88 | 2.8E-01 | |
| Well | 32 |
Correlations of sirtuins with OS in GC stratified by treatment
| Sirtuins | Treatment | Cases | HR | 95% CI | |
|---|---|---|---|---|---|
| SIRT1 | Surgery alone | 380 | 1.20 | 0.89–1.62 | 2.4E-01 |
| 5-FU adjuvant | 153 | ||||
| Other adjuvant | 76 | 1.99 | 0.72–5.47 | 1.8E-01 | |
| SIRT2 | Surgery alone | 380 | |||
| 5-FU adjuvant | 153 | ||||
| Other adjuvant | 76 | 6.10 | 1.41–26.33 | 5.7E-03 | |
| SIRT3 | Surgery alone | 380 | |||
| 5-FU adjuvant | 153 | 0.71 | 0.48–1.05 | 8.3E-02 | |
| Other adjuvant | 76 | 1.66 | 0.68–4.05 | 2.6E-01 | |
| SIRT4 | Surgery alone | 380 | |||
| 5-FU adjuvant | 153 | 1.25 | 0.85–1.84 | 2.5E-01 | |
| Other adjuvant | 76 | 0.60 | 0.22–1.66 | 3.2E-01 | |
| SIRT5 | Surgery alone | 380 | 1.26 | 0.94–1.69 | 1.2E-01 |
| 5-FU adjuvant | 34 | 0.23 | 0.08–0.68 | 3.7E-03 | |
| Other adjuvant | 76 | 0.75 | 0.31–1.80 | 5.1E-01 | |
| SIRT6 | Surgery alone | 380 | 1.33 | 1.00–1.79 | 5.2E-02 |
| 5-FU adjuvant | 153 | 1.26 | 0.89–1.79 | 1.9E-01 | |
| Other adjuvant | 76 | ||||
| SIRT7 | Surgery alone | 380 | |||
| 5-FU adjuvant | 153 | ||||
| Other adjuvant | 76 | 0.59 | 0.24–1.43 | 2.4E-01 |
Correlations of sirtuins with OS in GC stratified by HER2 status
| Sirtuins | HER2 status | Cases | HR | 95% CI | |
|---|---|---|---|---|---|
| SIRT1 | Negative | 532 | |||
| Positive | 344 | ||||
| SIRT2 | Negative | 532 | |||
| Positive | 344 | ||||
| SIRT3 | Negative | 532 | |||
| Positive | 344 | ||||
| SIRT4 | Negative | 532 | |||
| Positive | 344 | 1.28 | 0.98–1.67 | 7.0E-02 | |
| SIRT5 | Negative | 429 | 0.83 | 0.62–1.12 | 2.2E-01 |
| Positive | 202 | 0.63 | |||
| SIRT6 | Negative | 532 | 1.81 | ||
| Positive | 344 | 1.76 | |||
| SIRT7 | Negative | 532 | 1.91 | ||
| Positive | 344 | 1.60 |