Literature DB >> 29088792

Association of sirtuins with clinicopathological parameters and overall survival in gastric cancer.

Xiaobing Shen1, Pengfei Li1, Yuchao Xu1, Xiaowei Chen1, Haixiang Sun1, Ying Zhao1, Mengqi Liu1, Wenwen Zhang1.   

Abstract

To evaluate the associations of sirtuins (SIRT1-7) with clinicopathological parameters in gastric cancer, sirtuins expression profile in NCBI GEO datasets, GSE62254 and GSE15459, was integrated and analyzed. The results suggested that SIRT4, SIRT6, and SIRT7 were associated with Lauren classification and SIRT3-5 were associated with pStage in gastric cancer. Then an online database derived from 1,065 gastric cancer cases, Kaplan-Meier plotter, was used to explore the associations of the mRNA levels of sirtuins with overall survival in gastric cancer. Survival curves generated from Kaplan-Meier plotter suggested that high expression of SIRT1 mRNA was favorable for overall survival in gastric cancer (SIRT1: HR = 0.64, 95% CI = 0.54-0.76, P = 2.2E-07), high expressions of SIRT2-4 and SIRT6-7 were poor for overall survival (SIRT2: HR = 2.31, 95% CI = 1.87-2.87, P = 3.6E-15; SIRT3: HR = 1.99, 95% CI = 1.62-2.45, P = 2.6E-11; SIRT4: HR = 1.41, 95% CI = 1.19-1.68, P = 6.6E-05; SIRT6: HR = 2.02, 95% CI = 1.66-2.47, P = 1.7E-12; SIRT7: HR = 1.96, 95% CI = 1.63-2.35, P = 2.7E-13), whereas no significant association existed between SIRT5 mRNA expression and overall survival. Further analyses stratified by gender, stages, Lauren classification, differentiation, treatment, and HER2 status were also performed. In summary, high SIRT1 mRNA level was associated with better overall survival, SIRT2-4 and 6-7 were associated with poor overall survival, whereas SIRT5 did not show significant association with overall survival in gastric cancer.

Entities:  

Keywords:  gastric cancer; kaplan-meier plotter; overall survival; sirtuins

Year:  2017        PMID: 29088792      PMCID: PMC5650347          DOI: 10.18632/oncotarget.20799

Source DB:  PubMed          Journal:  Oncotarget        ISSN: 1949-2553


INTRODUCTION

Gastric cancer remains the major cause of cancer-related death with a bad prognosis [1-3]. Despite recent efforts in multimodal treatment approaches, approximately half of patients diagnosed with advanced gastric cancer still die from recurrent disease after surgical resection or distant metastasis [4, 5]. Now it has been recognized that multiple genetic and epigenetic alterations or abnormality occur in the development of GC [6]. Thus, the identification on the mechanism of initiation, progression, as well as investigation of differential diagnostic prognostic marker and potential drug target, is still needed and will help to provide better prognosis and individualized treatments. The sirtuins are a family of proteins homologous to yeast silent information regulator 2 (Sir2) and widely expressed in normal tissues in mammary animals. Up to now, seven members have been identified in human (SIRT1–7) and possess nicotinamide adenine dinucleotide (NAD+)-dependent lysine deacetylase (SIRT1, SIRT2, SIRT3, SIRT5, SIRT6, and SIRT7) and mono-ribosyltransferase (SIRT4 and SIRT6) activities [7-14]. Recently, SIRT5 was shown to be a NAD+-dependent protein lysine demalonylase and desuccinylase [15]. The sirtuins play essential roles in cellular physiology including cell metabolism, cell cycle, cell division, and transcriptional regulation and are also involved in the pathogenesis of series of diseases such as metabolic diseases [16], neurodegenerative diseases [17], cardiovascular diseases [18], and aging [19]. Some previous studies have been performed to explore the clinical value and mechanism of sirtuins in gastric cancer. However, the results are inconsistent and not all the seven sirtuins are investigated and compared. Kaplan-Meier plotter (KM plotter), an online tool, can be utilized to analyze correlations of individual genes with prognosis of patients. This database was initially established using data from a group of 1,809 breast cancer patients [20, 21]. Later, this database also included gene expression data of a total of 1,065 gastric cancer patients derived from NCBI GEO datasets GSE14210, GSE15459, GSE22377, GSE29272, GSE51105, and GSE62254. In this study, we used datasets GSE15459 and GSE62254 to explore the associations of sirtuins with clinicopathological parameters and used KM plotter database to determine the prognostic role of individual sirtuins in human gastric cancer.

RESULTS

Correlations of sirtuins with clinicopathological parameters in GC

The associations of sirtuins with the clinicopathological parameters of the patients with GC were firstly explored. We downloaded the datasets, GSE62254 and GSE15459, from NCBI GEO database. Both datasets were consisted of relative large cohort of GC patients and have also been included in the KM plotter database. In GSE62254, SIRT1 and SIRT2 exerted no associations with the clinical features, SIRT3 was associated with T stage, SIRT4 was associated with pStage, SIRT5 was associated with T stage, SIRT6 was associated with age, M stage, and pStage, and SIRT7 was associated with Lauren classification, N stage, and pStage (Table 1). In GSE15459, significant associations were found between Lauren classification and SIRT7, pStage and SIRT2, and pStage and SIRT3 (Table 2). In addition, GSE62254 and GSE15459 were also integrated to investigate the correlations of sirtuins with clinicopathological parameters in GC. The results suggested SIRT4, SIRT6, and SIRT7 were associated with Lauren classification, and SIRT3-5 were associated with pStage (Table 3). Meanwhile, the KM plotter database also included gene expression profile of normal/adjacent tissue from 57 cases. Compare with the normal/adjacent tissues, SIRT2-6 expression in GC cancer tissues was lower while SIRT1 and SIRT7 had no difference (Supplementary Table 1). However, the controls were rare and not each separate dataset was consisted of controls, and the results should further verified.
Table 1

Sirtuins and clinicopathological parameters in patients with GC (GSE62254)

ParametersCasesSIRT1+SIRT2+SIRT3+SIRT4+SIRT5+SIRT6+SIRT7+
Gender
Male1999896102939893101
Female10152544857525749
Age
< 65161788278877970*81
≥ 6513972687263718061
Lauren classification
Intestinal15075758569828385*
Diffuse14271726278646264
Mixed84333451
T stage
21888893105*93104*100102
39149473450363837
4211310117101211
N stage
03820191816192410*
113158606372716575
28046434442423342
35126282520182823
M stage
0273139133138139137143*133
1271117121113717
pStage
13014141711*1522*8*
29742465056554957
39653494752494247
47741413677313738

*P < 0.05 demonstrated by Chi-square test.

Table 2

Sirtuins and clinicopathological parameters in patients with GC (GSE15459)

ParameterCasesSIRT1+SIRT2+SIRT3+SIRT4+SIRT5+SIRT6+SIRT7+
Gender
Male12563676566596663
Female6733293130373033
Age
< 658442384740414542
≥ 6510854584956555154
Lauren classification
Intestinal9943494350495460*
Diffuse7542394541383328
Mixed1811885998
pStage
1311724*22*17191517
22917151516191513
37232313930353938
46030262033232728

*P < 0.05 demonstrated by Chi-square test.

Table 3

Sirtuins and clinicopathological parameters in patients with GC (integrated analysis of GSE62254 and GSE15459)

ParametersCasesSIRT1+SIRT2+SIRT3+SIRT4+SIRT5+SIRT6+SIRT7+
Gender
Male324161163167159157159164
Female16885837987898782
Age
< 65245120120125127120115123
≥ 65247126126121119126131115
Lauren classification
Intestinal249118124128119*131137*145*
Diffuse2171131111071191029592
Mixed26151111813149
pStage
161313839*28*34*3725
212659616572746470
316885808682848185
4137716756110546466

*P < 0.05 demonstrated by Chi-square test.

*P < 0.05 demonstrated by Chi-square test. *P < 0.05 demonstrated by Chi-square test. *P < 0.05 demonstrated by Chi-square test.

Correlations of sirtuins with OS in GC in overall

In overall, 876 GC cases in KM plotter database were available to investigate the correlations of SIRT1-4 and SIRT6-7 with OS while 631 cases were available for SIRT1. Auto select best cutoff value was used to split the patients in survival analyses. Survival curves suggested that high expression of SIRT1 mRNA was favorable for OS (SIRT1: HR = 0.64, 95% CI = 0.54–0.76, P = 2.2E-07), high expressions of SIRT2-4 and SIRT6-7 were poor for OS (SIRT2: HR = 2.31, 95% CI = 1.87–2.87, P = 3.6E-15; SIRT3: HR = 1.99, 95% CI = 1.62–2.45, P = 2.6E-11; SIRT4: HR = 1.41, 95% CI = 1.19–1.68, P = 6.6E-05; SIRT6: HR = 2.02, 95% CI = 1.66–2.47, P = 1.7E-12; SIRT7: HR = 1.96, 95% CI = 1.63–2.35, P = 2.7E-13), and no significant association existed between SIRT5 and OS in GC (Figure 1 and Table 4).
Figure 1

Correlations of sirtuins mRNA expressions with OS in all GC patients

(A) SIRT1 (n = 876). (B) SIRT2 (n = 876). (C) SIRT3 (n = 876). (D) SIRT4 (n = 876). (E) SIRT5 (n = 631). (F) SIRT6 (n = 836). (G) SIRT7 (n = 836).

Table 4

Correlations of sirtuins with OS in GC in overall

SirtuinsCasesHR95% CIP-value
SIRT18760.640.54–0.762.2E-07
SIRT28762.311.87–2.873.6E-15
SIRT38761.991.62–2.452.6E-11
SIRT48761.411.19–1.686.6E-05
SIRT56311.140.92–1.422.3E-01
SIRT68762.021.66–2.471.7E-12
SIRT78761.961.63–2.352.7E-13

Correlations of sirtuins mRNA expressions with OS in all GC patients

(A) SIRT1 (n = 876). (B) SIRT2 (n = 876). (C) SIRT3 (n = 876). (D) SIRT4 (n = 876). (E) SIRT5 (n = 631). (F) SIRT6 (n = 836). (G) SIRT7 (n = 836). Then we performed subgroup analyses to explore the effects of clinicopathological features, such as gender, stage, Lauren classification, differentiation, treatment, and HER2 status, on the associations between sirtuins mRNA expression and OS in GC. The effects of gender were firstly investigated. There were 545 male GC patients available for analyzing the correlations between SIRT1-4 and 6-7 and OS while there were 349 male GC patients available for SIRT5. And 236 female patients were available for SIRT1-4 and 6-7 and 187 female patients for SIRT5. Either in male patients or female patients, SIRT1-4 and SIRT6-7 were associated with OS while SIRT5 was not significantly associated with OS (Table 5).
Table 5

Correlations of sirtuins with OS in GC stratified by gender

SirtuinsGenderCasesHR95% CIP-value
SIRT1Male5450.450.31–0.661.7E-05
Female2360.630.51–0.771.3E-05
SIRT2Male5452.081.38–3.143.5E-04
Female2362.622.02–3.406.2E-14
SIRT3Male5452.121.41–3.182.1E-04
Female2362.071.60–2.671.8E-08
SIRT4Male5451.881.33–2.683.3E-04
Female2361.461.16–1.841.4E-03
SIRT5Male3490.760.48–1.202.3E-01
Female1870.800.57–1.122.0E-01
SIRT6Male5452.241.41–3.554.4E-04
Female2362.261.75–2.921.6E-10
SIRT7Male5451.961.38–2.791.2E-04
Female2362.121.68–2.676.6E-11
Secondly, subgroup analyses according to stage were performed. In patients with stage 1 cancer, significant association was only found between SIRT2 and OS (n = 67, Table 6). In stage 2, SIRT2, 3, 4, 6, and 7 were correlated with OS (n = 140). In stage 3, all sirtuins were correlated with OS (n = 305 for SIRT1-4 and 6-7, n = 197 for SIRT5). And in stage 4, significant association was identified between SIRT2, 5, 6, and 7 and OS (n = 140). Notably, unlike the results in overall, SIRT5 was significantly associated with OS in stage 3 and stage 4, however, exerting opposite effects on OS (stage 3, n=197, HR=1.70, 95% CI = 1.16–2.49, P = 6.3E-03; stage 4, n = 140, HR = 0.63, 95% CI = 0.42–0.94, P = 2.2E-02).
Table 6

Correlations of sirtuins with OS in GC stratified by stages

SirtuinsStageCasesHR95% CIP-value
SIRT11670.380.14–1.065.6E-02
21401.550.78–3.062.1E-01
33050.590.43–0.819.4E-04
41480.810.55–1.192.8E-01
SIRT21674.711.33–16.748.5E-03
21402.551.37–4.762.3E-03
33052.601.79–3.772.1E-07
41481.651.11–2.461.3E-02
SIRT316711.021.44–84.403.9E-03
21403.361.69–6.702.5E-04
33052.211.52–3.211.8E-05
41480.760.50–1.141.8E-01
SIRT41671.880.70–5.082.1E-01
21402.251.22–4.188.1E-03
33051.431.08–1.901.3E-02
41481.320.89–1.971.6E-01
SIRT51623.000.66–13.581.3E-01
21351.910.91–4.038.1E-02
31971.701.16–2.496.3E-03
41400.630.42–0.942.1E-02
SIRT61672.630.083–8.298.7E-02
21402.691.42–5.121.7E-03
33051.901.42–2.541.0E-05
41481.491.02–2.23.9E-02
SIRT71672.760.94–8.085.4E-02
21402.031.11–3.721.9E-02
33051.811.33–2.461.3E-04
41481.601.05–2.452.8E-02
Thirdly, Lauren classification was used to stratify the patients. SIRT1, 2, 3, 6, and 7 were found to be associated with OS in intestinal GC (n = 320, Table 7). SIRT2, 3, and 4 were associated with OS in diffuse GC (n = 141). And, only SIRT3 was associated with OS in mixed GC (n = 32).
Table 7

Correlations of sirtuins with OS in GC stratified by lauren classification

SirtuinsLauren classificationCasesHR95% CIP-value
SIRT1Intestinal3200.510.37–0.702.1E-05
Diffuse1411.260.88–1.812.1E-01
Mixed320.430.15–1.221.0E-01
SIRT2Intestinal3203.392.32–4.952.4E-11
Diffuse1411.711.17–2.515.4E-03
Mixed322.020.57–7.232.7E-01
SIRT3Intestinal3202.741.89–3.962.4E-08
Diffuse1411.441.01–2.044.3E-02
Mixed324.071.14–14.471.9E-02
SIRT4Intestinal3201.371.00–1.884.8E-02
Diffuse1411.591.13–2.247.1E-03
Mixed322.420.86–6.858.6E-02
SIRT5Intestinal1691.320.90–1.931.5E-01
Diffuse1400.790.56–1.121.8E-01
Mixed290.370.11–1.208.4E-02
SIRT6Intestinal3203.032.05–4.484.9E-09
Diffuse1411.380.98–1.956.8E-02
Mixed322.310.77–6.941.2E-01
SIRT7Intestinal3202.711.91–3.835.1E-09
Diffuse1411.370.97–1.927.1E-02
Mixed322.400.83–6.959.7E-02
Furthermore, subgroup analyses according to differentiation or treatment were also performed, respectively. In GC with poor differentiation, significant associations were identified between SIRT4-5 and OS (n = 165 for SIRT4; n = 121 for SIRT5, Table 8). And significant association was only found between SIRT3 and OS in GC with moderated differentiation (n = 67). In GC with well differentiation, SIRT3 and 7 was associated with OS (n = 32). For association between SIRT5 and OS in GC with well differentiation, analysis could not be conducted due to the case number was very small (n = 5). After grouping by treatment (surgery alone, 5-FU adjuvant therapy, or other adjuvant therapy), significant associations were found between SIRT2-4 and OS in GC patients underwent surgery alone (n = 380, Table 9). In patients underwent 5-FU adjuvant therapy, significant associations were found between SIRT1, 2, 5, and 7 and OS (n = 153, Table 9). And significant associations were found between SIRT6 and OS in patients underwent other adjuvant therapy (n = 76, Table 9).
Table 8

Correlations of sirtuins with OS in GC stratified by differentiation

SirtuinsDifferentiationCasesHR95% CIP-value
SIRT1Poor1650.710.46–1.101.2E-01
Moderate670.620.32–1.211.6E-01
Well320.500.19–1.301.5E-01
SIRT2Poor1650.720.48–1.101.3E-01
Moderate671.430.72–2.833.1E-01
Well320.440.15–1.311.3E-01
SIRT3Poor1651.240.83–1.852.9E-01
Moderate670.470.25–0.902.0E-02
Well323.891.59–9.491.5E-03
SIRT4Poor1651.791.19–2.684.2E-03
Moderate670.560.27–1.141.0E-01
Well320.450.18–1.158.8E-02
SIRT5Poor1210.570.35–0.932.1E-02
Moderate671.420.72–2.813.1E-01
Well5NA
SIRT6Poor1650.750.49–1.121.6E-01
Moderate671.750.9–3.429.5E-02
Well320.620.25–1.553.1E-01
SIRT7Poor1651.370.88–2.121.6E-01
Moderate671.610.67–3.882.8E-01
Well320.300.10–0.902.3E-02
Table 9

Correlations of sirtuins with OS in GC stratified by treatment

SirtuinsTreatmentCasesHR95% CIP-value
SIRT1Surgery alone3801.200.89–1.622.4E-01
5-FU adjuvant1530.640.44–0.952.4E-02
Other adjuvant761.990.72–5.471.8E-01
SIRT2Surgery alone3801.551.15–2.083.7E-03
5-FU adjuvant1530.680.48–0.962.8E-02
Other adjuvant766.101.41–26.335.7E-03
SIRT3Surgery alone3801.471.09–1.971.1E-02
5-FU adjuvant1530.710.48–1.058.3E-02
Other adjuvant761.660.68–4.052.6E-01
SIRT4Surgery alone3801.371.02–1.823.3E-02
5-FU adjuvant1531.250.85–1.842.5E-01
Other adjuvant760.600.22–1.663.2E-01
SIRT5Surgery alone3801.260.94–1.691.2E-01
5-FU adjuvant340.230.08–0.683.7E-03
Other adjuvant760.750.31–1.805.1E-01
SIRT6Surgery alone3801.331.00–1.795.2E-02
5-FU adjuvant1531.260.89–1.791.9E-01
Other adjuvant760.360.15–0.882.0E-02
SIRT7Surgery alone3801.351.01–1.804.3E-02
5-FU adjuvant1531.601.12–2.278.4E-03
Other adjuvant760.590.24–1.432.4E-01
Finally, effects of HER2 status on the associations between sirtuins and OS in GC were evaluated. In GC with negative HER2 status, all sirtuins except SIRT5 and SIRT7 were associated with OS (n = 532, Table 10) and in GC with positive HER2 status, all sirtuins except SIRT4 were associated with OS (n = 344 for SIRT1-4 and 6-7; n = 202 for SIRT5).
Table 10

Correlations of sirtuins with OS in GC stratified by HER2 status

SirtuinsHER2 statusCasesHR95% CIP-value
SIRT1Negative5320.640.51–0.811.4E-04
Positive3440.580.42–0.807.3E-04
SIRT2Negative5322.201.71–2.833.9E-10
Positive3441.581.14–2.185.5E-03
SIRT3Negative5321.681.31–2.153.2E-05
Positive3441.521.11–2.067.7E-03
SIRT4Negative5321.601.27–2.004.7E-05
Positive3441.280.98–1.677.0E-02
SIRT5Negative4290.830.62–1.122.2E-01
Positive2020.630.43–0.942.2E-02
SIRT6Negative5321.811.43–2.295.2E-07
Positive3441.761.28–2.413.8E-04
SIRT7Negative5321.911.53–2.401.0E-08
Positive3441.601.23–2.073.8E-04
In addition, the online database also included the first progression (FP) information of the GC patients, and the analyses results suggested that high expression of SIRT1 was associated with long FP time while high expression of SIRT2-4 and SIRT6-7 was associated with short FP time and no significant association was found between SIRT5 and FP in GC in overall (Supplementary Figure 1 and Supplementary Table 2).

DISCUSSION

Gastric cancer (GC) is main cause of cancer related death and presents high mortality rate among all digestive tract malignancies due to chemoradiotherapy resistance and distant metastasis. Thus it is crucial to reveal pathogenesis of GC and find novel prognostic strategies, early diagnostic tools, and effective therapeutic approaches. Here, we used an online database to explore the clinical value of sirtuins in predicting overall survival (OS) in GC. Of all the seven sirtuins, SIRT1 was the most studied one in GC. A series of studies have investigated the associations of SIRT1 with OS in GC. Of which, four studies reported that high SIRT1 expression was associated with poor OS [22-25] while one study reported that there was a trend of association between SIRT1 with good OS [26]. A meta-analysis combing the previous studies suggested that high SIRT1 expression was closely linked with the 3-year OS (OR = 0.25, 95% CI = 0.16–0.39, P < 0.00001, fixed model) while it was not associated with 5-year OS (OR = 0.44, 95% CI = 0.15–1.28, P = 0.13, random model) [27]. In our study, we found that high expression of SIRT1 mRNA was favorable for OS (SIRT1: HR = 0.64, 95% CI = 0.54–0.76, P = 2.2E-07). The inconsistency of these results might be due to the heterogeneity of these studies such as sample size, cancer site, and cutoff value. Several meta-analyses have also been performed to evaluate the associations of SIRT1 with OS in other solid carcinomas. All the meta-analyses studies revealed a significant association between high SIRT1 with poor OS in these solid carcinomas including breast cancer [28], hepatocellular carcinoma [29], colorectal cancer [30], lung cancer [31, 32], liver cancer [32]. Wang et al. also have pooled all the eligible data of solid malignancies and identified the same conclusion [32]. Mechanism researches suggested that SIRT1 can counteract the activation of STAT3 and NF-κB to repress cell growth [33] and lead to G1-phase arrest via NF-κB/Cyclin D1 signaling in gastric cancer[34]. The previous studies suggested that SIRT1 was also the target of certain microRNAs such as miR-543 and miR-204. miR-543 can promote gastric cancer cell proliferation by targeting SIRT1[35] and miR-204 can down-regulate SIRT1 and revert SIRT1-induced epithelial-mesenchymal transition, anoikis resistance, and invasion in gastric cancer[36]. For SIRT2, a previous study indicated that combination of SIRT2 with other three genes could be used to predict OS in GC[37]. Here, we identified that high expression of SIRT2 expression was a biomarker of worse OS in GC patients (HR = 2.31, 95% CI = 1.87–2.87, P = 3.6E-15). Up to now, there were three studies reporting the association of SIRT3 with OS in GC. The association was significant in two studies [38, 39] and insignificant in one study [40]. A meta-analysis has pooled the previous two studies and found increased SIRT3 expression was associated with better OS in GC, however, the total included cases were only 286 [41]. Our results suggested that high SIRT3 mRNA expression was associated with poor prognosis in GC (HR = 1.99, 95% CI = 1.62–2.45, P = 2.6E-11). The inconsistency needed to be verified in further studies with large scale of patients. Function studies revealed that SIRT3 plays dual role in GC development. Wang et al. reported that SIRT3 can inhibit cell proliferation in human gastric cancer through down-regulation of Notch-1 [42] whereas Cui et al. reported that SIRT3 can enhance glycolysis and proliferation in SIRT3-expressing GC Cells [43]. The study performed by Huang et al. suggested SIRT4 is associated with some clinicopathological features in GC but did not reported the association of SIRT4 with prognosis [44]. In the present study, we found that high SIRT4 mRNA expression exhibited a significant associations with Lauren classification, pStage, and OS in GC (OS: HR = 1.41, 95% CI = 1.19–1.68, P = 6.6E-05). Currently, SIRT5 and 6 have not been investigated in gastric cancer, but have been shown to be involved in other cancers, such as breast cancer, lung cancer, hepatocellular carcinoma, head and neck squamous cell carcinoma, and ovarian cancer [45-50]. Our study revealed that high SIRT6 expression was associated with poor OS in GC (HR = 2.02, 95% CI = 1.66–2.47, P = 1.7E-12) while SIRT5 was not correlated with OS (HR=1.14, 95% CI=0.92–1.42, P = 0.23). Interestingly, after stratification by stage or differentiation, high SIRT5 mRNA expression was associated with OS in stage 3 (HR=1.70, 95% CI = 1.16–2.49, P = 6.3E-03), stage 4 (HR = 0.63, 95% CI = 0.42–0.94), and poor differentiated GC (HR = 0.57, 95% CI = 0.35–0.93, P = 2.1E-02). The different effects of SIRT5 on OS in GC with different stages or differentiations should be checked in more large cohorts. Involvement of SIRT7 in GC was reported in only one study that it can promote gastric cancer growth and inhibit apoptosis by epigenetically inhibiting miR-34a and is associated with poor prognosis [51]. Here, we also identified SIRT7 as a biomarker for poor OS in GC (HR = 1.73, 95% CI = 1.45–2.05, P = 3.2E-10).

MATERIALS AND METHODS

To investigate the associations of sirtuins mRNA levels with clinicopathological parameters, we downloaded gastric cancer mRNA profile data and corresponding clinical data from publicly available GEO database. GSE62254 and GSE15459 with large number of gastric cancer patient samples and complete clinical information were selected, which had been also included in the Kaplan-Meier plotter database. The clinical samples were stratified into two groups by sirtuins mRNA levels with the median as cut-off value. The Chi-square test or Fisher’s exact test were performed to explore the correlations between sirtuins expression and clinicopathological parameters. Statistical analyses were conducted with the software GraphPad Prism 6. P value less than 0.05 was considered statistically significant. Then we used the Kaplan-Meier plotter (www.kmplot.com) to investigate the predictive value of mRNA expressions of sirtuins in overall survival in gastric cancer. Currently, the Kaplan-Meier plotter is capable to assess the effect of 54, 675 genes on survival of 10, 188 clinical cancer samples, including 4, 142 breast, 1, 648 ovarian, 2, 437 lung and 1, 065 gastric cancer patients[52]. Briefly, the seven sirtuins (SIRT1, SIRT2, SIRT3, SIRT4, SIRT5, SIRT6, and SIRT7) were entered into the database (http://kmplot.com/analysis/index. php?p = service and cancer = gastric) to obtain Kaplan-Meier plots in which the number-at-risk is indicated below the main plot. The Affy IDs of SIRT1-7 were 218878_s_at (SIRT1), 220605_s_at (SIRT2), 221913_at (SIRT3), 220047_at (SIRT4), 229112_at (SIRT5), 219613_s_at (SIRT6), and 218797_s_at (SIRT7), respectively. If the gene had multiple chip probe sets, JetSet best probe set was selected. The patient samples were divided into two groups according to the mRNA expression with auto select best cutoff value (high vs. low expression). The hazard ratio (HR) with 95% confidence intervals and log rank p value was calculated and displayed on the webpage. HER2 status was determined using the gene chip probe set 216836_s_at as described before [21].

CONCLUSIONS

To investigate and compare the clinical value of sirtuins in predicting overall survival in GC, we analyze the associations of all sirtuins (SIRT1-7) mRNA expressions with overall survival in GC using an online database, KM plotter. And the results suggested that high SIRT1 mRNA level was associated with better overall survival, SIRT2-4 and 6-7 were associated with poor overall survival, whereas SIRT5 did not show significant association with overall survival in GC.
  52 in total

1.  Silent information regulator 2 family of NAD- dependent histone/protein deacetylases generates a unique product, 1-O-acetyl-ADP-ribose.

Authors:  K G Tanner; J Landry; R Sternglanz; J M Denu
Journal:  Proc Natl Acad Sci U S A       Date:  2000-12-19       Impact factor: 11.205

2.  SIRT3 inhibits cell proliferation in human gastric cancer through down-regulation of Notch-1.

Authors:  Liang Wang; Wei-Yan Wang; Li-Ping Cao
Journal:  Int J Clin Exp Med       Date:  2015-04-15

3.  Aberrant expression of SIRT3 is conversely correlated with the progression and prognosis of human gastric cancer.

Authors:  Bing Yang; Xueqiong Fu; Liang Shao; Yu Ding; Duan Zeng
Journal:  Biochem Biophys Res Commun       Date:  2013-11-25       Impact factor: 3.575

Review 4.  The sirtuin family's role in aging and age-associated pathologies.

Authors:  Jessica A Hall; John E Dominy; Yoonjin Lee; Pere Puigserver
Journal:  J Clin Invest       Date:  2013-03-01       Impact factor: 14.808

5.  Cell cycle-dependent deacetylation of telomeric histone H3 lysine K56 by human SIRT6.

Authors:  Eriko Michishita; Ronald A McCord; Lisa D Boxer; Matthew F Barber; Tao Hong; Or Gozani; Katrin F Chua
Journal:  Cell Cycle       Date:  2009-08-26       Impact factor: 4.534

6.  Clinicopathological significance of SIRT1 and p300/CBP expression in gastroesophageal junction (GEJ) cancer and the correlation with E-cadherin and MLH1.

Authors:  Li-Hua Zhang; Qin Huang; Xiang-Shan Fan; Hong-Yan Wu; Jun Yang; An-Ning Feng
Journal:  Pathol Res Pract       Date:  2013-04-28       Impact factor: 3.250

7.  Prognostic and clinical value of Sirt1 expression in gastric cancer: A systematic meta-analysis.

Authors:  Bin Jiang; Jin-Huang Chen; Wen-Zheng Yuan; Jin-Tong Ji; Zheng-Yi Liu; Liang Wu; Qiang Tang; Xiao-Gang Shu
Journal:  J Huazhong Univ Sci Technolog Med Sci       Date:  2016-04-13

8.  Sirt5 is a NAD-dependent protein lysine demalonylase and desuccinylase.

Authors:  Jintang Du; Yeyun Zhou; Xiaoyang Su; Jiu Jiu Yu; Saba Khan; Hong Jiang; Jungwoo Kim; Jimin Woo; Jun Huyn Kim; Brian Hyun Choi; Bin He; Wei Chen; Sheng Zhang; Richard A Cerione; Johan Auwerx; Quan Hao; Hening Lin
Journal:  Science       Date:  2011-11-11       Impact factor: 47.728

9.  Sirt7 promotes gastric cancer growth and inhibits apoptosis by epigenetically inhibiting miR-34a.

Authors:  Shun Zhang; Ping Chen; Zuoan Huang; Xiaorong Hu; Mengting Chen; Shanshan Hu; Yixin Hu; Ting Cai
Journal:  Sci Rep       Date:  2015-04-10       Impact factor: 4.379

10.  Upregulation of SIRT6 predicts poor prognosis and promotes metastasis of non-small cell lung cancer via the ERK1/2/MMP9 pathway.

Authors:  Lihong Bai; Gengpeng Lin; Longhua Sun; Yangli Liu; Xinyan Huang; Chuangjie Cao; Yubiao Guo; Canmao Xie
Journal:  Oncotarget       Date:  2016-06-28
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  10 in total

1.  [Bioinformatics analysis of expression and function of EXD3 gene in gastric cancer].

Authors:  Dengzhong Sun; Mulin Liu; Fuxin Huang; Fuxin Huang
Journal:  Nan Fang Yi Ke Da Xue Xue Bao       Date:  2019-02-28

2.  Resveratrol Analog 4-Bromo-Resveratrol Inhibits Gastric Cancer Stemness through the SIRT3-c-Jun N-Terminal Kinase Signaling Pathway.

Authors:  Yun-Shen Tai; Yi-Shih Ma; Chun-Lin Chen; Hsin-Yi Tsai; Chin-Chuan Tsai; Meng-Chieh Wu; Chih-Yi Chen; Ming-Wei Lin
Journal:  Curr Issues Mol Biol       Date:  2021-12-22       Impact factor: 2.976

3.  Sirtuin 7 promotes non‑small cell lung cancer progression by facilitating G1/S phase and epithelial‑mesenchymal transition and activating AKT and ERK1/2 signaling.

Authors:  Yingying Zhao; Xia Ye; Ruifang Chen; Qian Gao; Daguo Zhao; Chunhua Ling; Yulan Qian; Chun Xu; Min Tao; Yufeng Xie
Journal:  Oncol Rep       Date:  2020-07-07       Impact factor: 3.906

Review 4.  SIRT1 in Secretory Organ Cancer.

Authors:  Raffaele Frazzi
Journal:  Front Endocrinol (Lausanne)       Date:  2018-09-24       Impact factor: 5.555

5.  SIRT6 Is Involved in the Progression of Ovarian Carcinomas via β-Catenin-Mediated Epithelial to Mesenchymal Transition.

Authors:  Jun Sang Bae; Sang Jae Noh; Kyoung Min Kim; See-Hyoung Park; Usama Khamis Hussein; Ho Sung Park; Byung-Hyun Park; Sang Hoon Ha; Ho Lee; Myoung Ja Chung; Woo Sung Moon; Dong Hyu Cho; Kyu Yun Jang
Journal:  Front Oncol       Date:  2018-11-20       Impact factor: 6.244

6.  SIRT2 Promotes the Migration and Invasion of Gastric Cancer through RAS/ERK/JNK/MMP-9 Pathway by Increasing PEPCK1-Related Metabolism.

Authors:  Yang Li; Mingming Zhang; Robert G Dorfman; Yida Pan; Dehua Tang; Lei Xu; Zhenguo Zhao; Qian Zhou; Lixing Zhou; Yuming Wang; Yuyao Yin; Shanshan Shen; Bo Kong; Helmut Friess; Shimin Zhao; Lei Wang; Xiaoping Zou
Journal:  Neoplasia       Date:  2018-06-17       Impact factor: 5.715

7.  Tumor-suppressive function of SIRT4 in neuroblastoma through mitochondrial damage.

Authors:  Yumei Wang; Yinmou Guo; Jianzhi Gao; Xiangdong Yuan
Journal:  Cancer Manag Res       Date:  2018-11-09       Impact factor: 3.989

Review 8.  Clinicopathological and prognostic value of SIRT6 in patients with solid tumors: a meta-analysis and TCGA data review.

Authors:  Xiaojing Wu; Shuyuan Wang; Xuanzhu Zhao; Sizhen Lai; Zhen Yuan; Yixiang Zhan; Kemin Ni; Zhaoce Liu; Lina Liu; Ran Xin; Xingyu Zhou; Xin Yin; Xinyu Liu; Xipeng Zhang; Wei Cui; Chunze Zhang
Journal:  Cancer Cell Int       Date:  2022-02-16       Impact factor: 5.722

9.  SIRT1 suppresses the migration and invasion of gastric cancer by regulating ARHGAP5 expression.

Authors:  Guoying Dong; Bo Wang; Yifei An; Juan Li; Xin Wang; Jihui Jia; Qing Yang
Journal:  Cell Death Dis       Date:  2018-09-24       Impact factor: 8.469

10.  Inhibition of SIRT6 potentiates the anti-tumor effect of doxorubicin through suppression of the DNA damage repair pathway in osteosarcoma.

Authors:  Zhongkai Zhang; Sang Hoon Ha; Young Jae Moon; Usama Khamis Hussein; Yiping Song; Kyoung Min Kim; See-Hyoung Park; Ho Sung Park; Byung-Hyun Park; Ae-Ri Ahn; Sang-A Lee; Su Jin Ahn; Jung Ryul Kim; Kyu Yun Jang
Journal:  J Exp Clin Cancer Res       Date:  2020-11-17
  10 in total

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