Literature DB >> 29088127

SourceData: a semantic platform for curating and searching figures.

Robin Liechti1, Nancy George2,3, Lou Götz1, Sara El-Gebali2,3, Anastasia Chasapi1, Isaac Crespo1, Ioannis Xenarios1, Thomas Lemberger2.   

Abstract

Mesh：

Year:  2017        PMID： 29088127     DOI： 10.1038/nmeth.4471

Source DB:  PubMed          Journal:  Nat Methods        ISSN： 1548-7091            Impact factor:   28.547


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  5 in total

1.  Autophagic targeting of Src promotes cancer cell survival following reduced FAK signalling.

Authors:  Emma Sandilands; Bryan Serrels; David G McEwan; Jennifer P Morton; Juan Pablo Macagno; Kenneth McLeod; Craig Stevens; Valerie G Brunton; Wallace Y Langdon; Marcos Vidal; Owen J Sansom; Ivan Dikic; Simon Wilkinson; Margaret C Frame
Journal:  Nat Cell Biol       Date:  2011-12-04       Impact factor: 28.824

2.  Sharing research data to improve public health.

Authors:  Mark Walport; Paul Brest
Journal:  Lancet       Date:  2011-01-07       Impact factor: 79.321

3.  An update on data reporting standards.

Authors: 
Journal:  Nat Cell Biol       Date:  2014-05       Impact factor: 28.824

4.  From bench to website.

Authors:  Thomas Lemberger
Journal:  Mol Syst Biol       Date:  2010-08-31       Impact factor: 11.429

5.  Evolving BioAssay Ontology (BAO): modularization, integration and applications.

Authors:  Saminda Abeyruwan; Uma D Vempati; Hande Küçük-McGinty; Ubbo Visser; Amar Koleti; Ahsan Mir; Kunie Sakurai; Caty Chung; Joshua A Bittker; Paul A Clemons; Steve Brudz; Anosha Siripala; Arturo J Morales; Martin Romacker; David Twomey; Svetlana Bureeva; Vance Lemmon; Stephan C Schürer
Journal:  J Biomed Semantics       Date:  2014-06-03
  5 in total
  14 in total

1.  PMC text mining subset in BioC: about three million full-text articles and growing.

Authors:  Donald C Comeau; Chih-Hsuan Wei; Rezarta Islamaj Doğan; Zhiyong Lu
Journal:  Bioinformatics       Date:  2019-09-15       Impact factor: 6.937

2.  Navigating in vitro bioactivity data by investigating available resources using model compounds.

Authors:  Sten Ilmjärv; Fiona Augsburger; Jerven Tjalling Bolleman; Robin Liechti; Alan James Bridge; Jenny Sandström; Vincent Jaquet; Ioannis Xenarios; Karl-Heinz Krause
Journal:  Sci Data       Date:  2019-04-29       Impact factor: 6.444

3.  The fifth decade.

Authors:  Bernd Pulverer; Facundo D Batista
Journal:  EMBO J       Date:  2021-04-12       Impact factor: 11.598

4.  Sharing and reusing cell image data.

Authors:  Assaf Zaritsky
Journal:  Mol Biol Cell       Date:  2018-06-01       Impact factor: 4.138

5.  Biocuration: Distilling data into knowledge.

Authors: 
Journal:  PLoS Biol       Date:  2018-04-16       Impact factor: 8.029

6.  SPRENO: a BioC module for identifying organism terms in figure captions.

Authors:  Hong-Jie Dai; Onkar Singh
Journal:  Database (Oxford)       Date:  2018-01-01       Impact factor: 3.451

7.  Data citation: what, when, why?

Authors:  Thomas Lemberger
Journal:  Mol Syst Biol       Date:  2018-12-17       Impact factor: 11.429

8.  FamPlex: a resource for entity recognition and relationship resolution of human protein families and complexes in biomedical text mining.

Authors:  John A Bachman; Benjamin M Gyori; Peter K Sorger
Journal:  BMC Bioinformatics       Date:  2018-06-28       Impact factor: 3.169

Review 9.  Harmonizing semantic annotations for computational models in biology.

Authors:  Maxwell Lewis Neal; Matthias König; David Nickerson; Göksel Mısırlı; Reza Kalbasi; Andreas Dräger; Koray Atalag; Vijayalakshmi Chelliah; Michael T Cooling; Daniel L Cook; Sharon Crook; Miguel de Alba; Samuel H Friedman; Alan Garny; John H Gennari; Padraig Gleeson; Martin Golebiewski; Michael Hucka; Nick Juty; Chris Myers; Brett G Olivier; Herbert M Sauro; Martin Scharm; Jacky L Snoep; Vasundra Touré; Anil Wipat; Olaf Wolkenhauer; Dagmar Waltemath
Journal:  Brief Bioinform       Date:  2019-03-22       Impact factor: 11.622

10.  Knowledge-enhanced biomedical named entity recognition and normalization: application to proteins and genes.

Authors:  Huiwei Zhou; Shixian Ning; Zhe Liu; Chengkun Lang; Zhuang Liu; Bizun Lei
Journal:  BMC Bioinformatics       Date:  2020-01-30       Impact factor: 3.169
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