Literature DB >> 29087519

Out of Southern East Asia of the Brown Rat Revealed by Large-Scale Genome Sequencing.

Lin Zeng1,2, Chen Ming3,4, Yan Li1,5, Ling-Yan Su2,6, Yan-Hua Su7, Newton O Otecko1,2,8, Ambroise Dalecky9,10, Stephen Donnellan11, Ken Aplin12, Xiao-Hui Liu13, Ying Song13, Zhi-Bin Zhang14, Ali Esmailizadeh15, Saeed S Sohrabi15, Hojjat Asadollahpour Nanaei15, He-Qun Liu1,2, Ming-Shan Wang1,2, Solimane Ag Atteynine16,17, Gérard Rocamora18, Fabrice Brescia19, Serge Morand20, David M Irwin1,21, Ming-Sheng Peng1,2,8, Yong-Gang Yao2,6, Hai-Peng Li3, Dong-Dong Wu1,2,8, Ya-Ping Zhang1,2,5.   

Abstract

The geographic origin and migration of the brown rat (Rattus norvegicus) remain subjects of considerable debate. In this study, we sequenced whole genomes of 110 wild brown rats with a diverse world-wide representation. We reveal that brown rats migrated out of southern East Asia, rather than northern Asia as formerly suggested, into the Middle East and then to Europe and Africa, thousands of years ago. Comparison of genomes from different geographical populations reveals that many genes involved in the immune system experienced positive selection in the wild brown rat.
© The Author 2017. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Entities:  

Keywords:  Rattus norvegicus; demographic history; natural selection; origin

Mesh:

Year:  2018        PMID: 29087519     DOI: 10.1093/molbev/msx276

Source DB:  PubMed          Journal:  Mol Biol Evol        ISSN: 0737-4038            Impact factor:   16.240


  12 in total

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5.  Demographic History and Genomic Response to Environmental Changes in a Rapid Radiation of Wild Rats.

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Journal:  Mol Biol Evol       Date:  2021-05-04       Impact factor: 16.240

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Review 7.  The origins of the domesticate brown rat (Rattus norvegicus) and its pathways to domestication.

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8.  Shared Common Ancestry of Rodent Alphacoronaviruses Sampled Globally.

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Journal:  Viruses       Date:  2019-01-30       Impact factor: 5.048

9.  Dispersal route of the Asian house rat (Rattus tanezumi) on mainland China: insights from microsatellite and mitochondrial DNA.

Authors:  Song Guo; Guichang Li; Jinli Liu; Jun Wang; Liang Lu; Qiyong Liu
Journal:  BMC Genet       Date:  2019-01-22       Impact factor: 2.797

10.  Association of rodents with man-made infrastructures and food waste in Urban Singapore.

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