Literature DB >> 29087279

Psedoduganella eburnea sp. nov., isolated from lagoon sediments.

Da-Hye Jin1, Y Subhash1,2, Sang-Seob Lee1.   

Abstract

Strain 10R5-21T was isolated from lagoon sediments. Cells of strain 10R5-21T were Gram-reaction-negative, rod-shaped and motile by means of polar flagella. The strain was obligately aerobic and positive for catalase and oxidase activity. Strain 10R5-21T was able to grow at 10-37 ˚C (optimum 25-30 ˚C), at pH 5.0-9.0 (optimum pH 6.5-7.5) and in the presence of 0-0.5 % (w/v) NaCl (optimum 0 %). C16 : 1ω7c/C16 : 1ω6c, C16 : 0 and C12 : 0 were present as predominant (>5 %) fatty acids. Q-8 was identified as the major respiratory quinone. Diphosphatidylglycerol, phosphatidylglycerol and phosphatidylethanolamine were present as major polar lipids with minor amounts of unidentified aminophospholipids and unidentified aminolipids. The genomic G+C content of strain 10R5-21T was 64.1 mol%. 16S rRNA gene sequence analysis indicated that strain 10R5-21T belongs to the genus Pseudoduganella within the family Oxalobacteraceae of the class Betaproteobacteria. Strain 10R5-21T shared 98.8 % 16S rRNA gene sequence similarity with Pseudoduganella violaceinigra YIM 31327T. DNA-DNA hybridization values between strain 10R5-21T and P. violaceinigra KACC 11669T were clearly below the 70 % threshold. Distinct morphological, biochemical, chemotaxonomic and genetic differences from previously described taxa support the classification of strain 10R5-21T as a representative of a novel species in the genus Pseudoduganella, for which the name Pseudoduganella eburnea sp. nov. is proposed. The type strain is 10R5-21T (=KEMB 563-061T=JCM 31587T).

Entities:  

Keywords:  Oxalobacteraceae; Pseudoduganella; novel species

Mesh:

Substances:

Year:  2017        PMID: 29087279     DOI: 10.1099/ijsem.0.002460

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  1 in total

1.  Duganella aceris sp. nov., isolated from tree sap and proposal to transfer of Rugamonas aquatica and Rugamonas rivuli to the genus Duganella as Duganella aquatica comb. nov., with the emended description of the genus Rugamonas.

Authors:  In Seop Kim; Soon Dong Lee; Dabin Jeon; Hanna Choe; Ji-Sun Kim
Journal:  Arch Microbiol       Date:  2021-03-22       Impact factor: 2.552

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.