Literature DB >> 29083930

Convolutional Neural Network for Histopathological Analysis of Osteosarcoma.

Rashika Mishra1, Ovidiu Daescu1, Patrick Leavey2, Dinesh Rakheja2, Anita Sengupta2.   

Abstract

Pathologists often deal with high complexity and sometimes disagreement over osteosarcoma tumor classification due to cellular heterogeneity in the dataset. Segmentation and classification of histology tissue in H&E stained tumor image datasets is a challenging task because of intra-class variations, inter-class similarity, crowded context, and noisy data. In recent years, deep learning approaches have led to encouraging results in breast cancer and prostate cancer analysis. In this article, we propose convolutional neural network (CNN) as a tool to improve efficiency and accuracy of osteosarcoma tumor classification into tumor classes (viable tumor, necrosis) versus nontumor. The proposed CNN architecture contains eight learned layers: three sets of stacked two convolutional layers interspersed with max pooling layers for feature extraction and two fully connected layers with data augmentation strategies to boost performance. The use of a neural network results in higher accuracy of average 92% for the classification. We compare the proposed architecture with three existing and proven CNN architectures for image classification: AlexNet, LeNet, and VGGNet. We also provide a pipeline to calculate percentage necrosis in a given whole slide image. We conclude that the use of neural networks can assure both high accuracy and efficiency in osteosarcoma classification.

Entities:  

Keywords:  convolutional neural network; histology image analysis; osteosarcoma

Mesh:

Year:  2017        PMID: 29083930     DOI: 10.1089/cmb.2017.0153

Source DB:  PubMed          Journal:  J Comput Biol        ISSN: 1066-5277            Impact factor:   1.479


  12 in total

1.  Automatic detection of osteosarcoma based on integrated features and feature selection using binary arithmetic optimization algorithm.

Authors:  Priti Bansal; Kshitiz Gehlot; Abhishek Singhal; Abhishek Gupta
Journal:  Multimed Tools Appl       Date:  2022-02-07       Impact factor: 2.577

2.  Improving Generalization of Deep Learning Models for Diagnostic Pathology by Increasing Variability in Training Data: Experiments on Osteosarcoma Subtypes.

Authors:  Haiming Tang; Nanfei Sun; Steven Shen
Journal:  J Pathol Inform       Date:  2021-08-04

3.  Digital Assessment of Stained Breast Tissue Images for Comprehensive Tumor and Microenvironment Analysis.

Authors:  Shachi Mittal; Catalin Stoean; Andre Kajdacsy-Balla; Rohit Bhargava
Journal:  Front Bioeng Biotechnol       Date:  2019-10-01

4.  Automated quantitative analysis of Ki-67 staining and HE images recognition and registration based on whole tissue sections in breast carcinoma.

Authors:  Min Feng; Yang Deng; Libo Yang; Qiuyang Jing; Zhang Zhang; Lian Xu; Xiaoxia Wei; Yanyan Zhou; Diwei Wu; Fei Xiang; Yizhe Wang; Ji Bao; Hong Bu
Journal:  Diagn Pathol       Date:  2020-05-29       Impact factor: 2.644

5.  Batch Similarity Based Triplet Loss Assembled into Light-Weighted Convolutional Neural Networks for Medical Image Classification.

Authors:  Zhiwen Huang; Quan Zhou; Xingxing Zhu; Xuming Zhang
Journal:  Sensors (Basel)       Date:  2021-01-24       Impact factor: 3.576

6.  Qualitative Histopathological Classification of Primary Bone Tumors Using Deep Learning: A Pilot Study.

Authors:  Yuzhang Tao; Xiao Huang; Yiwen Tan; Hongwei Wang; Weiqian Jiang; Yu Chen; Chenglong Wang; Jing Luo; Zhi Liu; Kangrong Gao; Wu Yang; Minkang Guo; Boyu Tang; Aiguo Zhou; Mengli Yao; Tingmei Chen; Youde Cao; Chengsi Luo; Jian Zhang
Journal:  Front Oncol       Date:  2021-10-06       Impact factor: 6.244

7.  Correlation of histopathology and multi-modal magnetic resonance imaging in childhood osteosarcoma: Predicting tumor response to chemotherapy.

Authors:  Ka Yaw Teo; Ovidiu Daescu; Kevin Cederberg; Anita Sengupta; Patrick J Leavey
Journal:  PLoS One       Date:  2022-02-14       Impact factor: 3.240

8.  Identification of gastric cancer with convolutional neural networks: a systematic review.

Authors:  Yuxue Zhao; Bo Hu; Ying Wang; Xiaomeng Yin; Yuanyuan Jiang; Xiuli Zhu
Journal:  Multimed Tools Appl       Date:  2022-02-18       Impact factor: 2.577

Review 9.  Emerging Applications of Deep Learning in Bone Tumors: Current Advances and Challenges.

Authors:  Xiaowen Zhou; Hua Wang; Chengyao Feng; Ruilin Xu; Yu He; Lan Li; Chao Tu
Journal:  Front Oncol       Date:  2022-07-19       Impact factor: 5.738

10.  Automated classification of cancer from fine needle aspiration cytological image use neural networks: A meta-analysis.

Authors:  Jian Huang; Dongcun Wang; Jiping Da
Journal:  Diagn Cytopathol       Date:  2020-06-12       Impact factor: 1.390

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