Literature DB >> 29082075

Label-free sensing of the binding state of MUC1 peptide and anti-MUC1 aptamer solution in fluidic chip by terahertz spectroscopy.

Xiang Zhao1,2, Mingkun Zhang3,2, Dongshan Wei3, Yunxia Wang1, Shihan Yan3, Mengwan Liu3, Xiang Yang1, Ke Yang1, Hong-Liang Cui3,4, Weiling Fu1,5.   

Abstract

The aptamer and target molecule binding reaction has been widely applied for construction of aptasensors, most of which are labeled methods. In contrast, terahertz technology proves to be a label-free sensing tool for biomedical applications. We utilize terahertz absorption spectroscopy and molecular dynamics simulation to investigate the variation of binding-induced collective vibration of hydrogen bond network in a mixed solution of MUC1 peptide and anti-MUC1 aptamer. The results show that binding-induced alterations of hydrogen bond numbers could be sensitively reflected by the variation of terahertz absorption coefficients of the mixed solution in a customized fluidic chip. The minimal detectable concentration is determined as 1 pmol/μL, which is approximately equal to the optimal immobilized concentration of aptasensors.

Entities:  

Keywords:  (170.1420) Biology; (280.1415) Biological sensing and sensors; (300.6495) Spectroscopy, terahertz

Year:  2017        PMID: 29082075      PMCID: PMC5654790          DOI: 10.1364/BOE.8.004427

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  31 in total

1.  Rotational motion in liquid water is anisotropic: a nuclear magnetic resonance and molecular dynamics simulation study.

Authors:  J Ropp; C Lawrence; T C Farrar; J L Skinner
Journal:  J Am Chem Soc       Date:  2001-08-22       Impact factor: 15.419

2.  Rapid and Label-Free Strategy to Isolate Aptamers for Metal Ions.

Authors:  Hao Qu; Andrew T Csordas; Jinpeng Wang; Seung Soo Oh; Michael S Eisenstein; Hyongsok Tom Soh
Journal:  ACS Nano       Date:  2016-07-11       Impact factor: 15.881

3.  An extended dynamical hydration shell around proteins.

Authors:  Simon Ebbinghaus; Seung Joong Kim; Matthias Heyden; Xin Yu; Udo Heugen; Martin Gruebele; David M Leitner; Martina Havenith
Journal:  Proc Natl Acad Sci U S A       Date:  2007-12-19       Impact factor: 11.205

4.  THz spectra and dynamics of aqueous solutions studied by the ultrafast optical Kerr effect.

Authors:  Kamila Mazur; Ismael A Heisler; Stephen R Meech
Journal:  J Phys Chem B       Date:  2011-02-28       Impact factor: 2.991

5.  Label-free detection and characterization of the binding of hemagglutinin protein and broadly neutralizing monoclonal antibodies using terahertz spectroscopy.

Authors:  Yiwen Sun; Junlan Zhong; Cunlin Zhang; Jian Zuo; Emma Pickwell-MacPherson
Journal:  J Biomed Opt       Date:  2015-03       Impact factor: 3.170

6.  Label-free and high-sensitive detection of human breast cancer cells by aptamer-based leaky surface acoustic wave biosensor array.

Authors:  Kai Chang; Yan Pi; Weiping Lu; Feng Wang; Feng Pan; Fake Li; Shuangrong Jia; Jianfeng Shi; Shaoli Deng; Ming Chen
Journal:  Biosens Bioelectron       Date:  2014-04-30       Impact factor: 10.618

7.  Terahertz identification and quantification of neurotransmitter and neurotrophy mixture.

Authors:  Yan Peng; Xiaorong Yuan; Xiang Zou; Wanqing Chen; Hui Huang; Hongwei Zhao; Bo Song; Liang Chen; Yiming Zhu
Journal:  Biomed Opt Express       Date:  2016-10-06       Impact factor: 3.732

8.  Ionic contrast terahertz near-field imaging of axonal water fluxes.

Authors:  Jean-Baptiste Masson; Martin-Pierre Sauviat; Jean-Louis Martin; Guilhem Gallot
Journal:  Proc Natl Acad Sci U S A       Date:  2006-03-17       Impact factor: 11.205

9.  DNA aptamers that bind to MUC1 tumour marker: design and characterization of MUC1-binding single-stranded DNA aptamers.

Authors:  C S M Ferreira; C S Matthews; S Missailidis
Journal:  Tumour Biol       Date:  2006-10-09

Review 10.  MUC1, the renaissance molecule.

Authors:  S J Gendler
Journal:  J Mammary Gland Biol Neoplasia       Date:  2001-07       Impact factor: 2.698

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  2 in total

1.  Study on an artificial phenomenon observed in terahertz biological imaging.

Authors:  Zhongbo Yang; Muyang Zhang; Dandan Li; Ligang Chen; Ailing Fu; Yanmei Liang; Huabin Wang
Journal:  Biomed Opt Express       Date:  2021-05-06       Impact factor: 3.732

2.  Terahertz circular polarization sensing for protein denaturation based on a twisted dual-layer metasurface.

Authors:  Ziyang Zhang; Fei Fan; Weinan Shi; Tianrui Zhang; Shengjiang Chang
Journal:  Biomed Opt Express       Date:  2021-12-07       Impact factor: 3.732

  2 in total

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