Literature DB >> 29075944

Regulation of DNA break repair by transcription and RNA.

Jian Ouyang1, Li Lan2,3, Lee Zou4,5.   

Abstract

Repair of DNA double-strand breaks (DSBs) via the homologous recombination (HR) pathway is a highly regulated process. A number of proteins that participate in HR are intricately modulated by the cell cycle and chromatin environments of DSBs. Recent studies have revealed a clear impact of transcription on HR in transcribed regions of the genome. Several models have been put forth to explain how the process of transcription and/or its RNA products may influence HR. Here we discuss the results and models from these studies, presenting an emerging view of transcription-coupled DSB repair.

Entities:  

Keywords:  DNA break repair; RNA; transcription

Mesh:

Substances:

Year:  2017        PMID: 29075944      PMCID: PMC5914165          DOI: 10.1007/s11427-017-9164-1

Source DB:  PubMed          Journal:  Sci China Life Sci        ISSN: 1674-7305            Impact factor:   6.038


  22 in total

1.  A chromatin landmark and transcription initiation at most promoters in human cells.

Authors:  Matthew G Guenther; Stuart S Levine; Laurie A Boyer; Rudolf Jaenisch; Richard A Young
Journal:  Cell       Date:  2007-07-13       Impact factor: 41.582

2.  DNA damage during the G0/G1 phase triggers RNA-templated, Cockayne syndrome B-dependent homologous recombination.

Authors:  Leizhen Wei; Satoshi Nakajima; Stefanie Böhm; Kara A Bernstein; Zhiyuan Shen; Michael Tsang; Arthur S Levine; Li Lan
Journal:  Proc Natl Acad Sci U S A       Date:  2015-06-22       Impact factor: 11.205

3.  Transient RNA-DNA Hybrids Are Required for Efficient Double-Strand Break Repair.

Authors:  Corina Ohle; Rafael Tesorero; Géza Schermann; Nikolay Dobrev; Irmgard Sinning; Tamás Fischer
Journal:  Cell       Date:  2016-10-27       Impact factor: 41.582

4.  Cockayne syndrome group B protein regulates DNA double-strand break repair and checkpoint activation.

Authors:  Nicole L Batenburg; Elizabeth L Thompson; Eric A Hendrickson; Xu-Dong Zhu
Journal:  EMBO J       Date:  2015-03-27       Impact factor: 11.598

5.  A mechanism for the suppression of homologous recombination in G1 cells.

Authors:  Alexandre Orthwein; Sylvie M Noordermeer; Marcus D Wilson; Sébastien Landry; Radoslav I Enchev; Alana Sherker; Meagan Munro; Jordan Pinder; Jayme Salsman; Graham Dellaire; Bing Xia; Matthias Peter; Daniel Durocher
Journal:  Nature       Date:  2015-12-09       Impact factor: 49.962

6.  RNA-templated DNA repair.

Authors:  Francesca Storici; Katarzyna Bebenek; Thomas A Kunkel; Dmitry A Gordenin; Michael A Resnick
Journal:  Nature       Date:  2007-04-11       Impact factor: 49.962

Review 7.  Transcription-coupled DNA repair: two decades of progress and surprises.

Authors:  Philip C Hanawalt; Graciela Spivak
Journal:  Nat Rev Mol Cell Biol       Date:  2008-12       Impact factor: 94.444

8.  Small RNAs Recruit Chromatin-Modifying Enzymes MMSET and Tip60 to Reconfigure Damaged DNA upon Double-Strand Break and Facilitate Repair.

Authors:  Qinhong Wang; Michael Goldstein
Journal:  Cancer Res       Date:  2016-01-28       Impact factor: 12.701

9.  Site-specific DICER and DROSHA RNA products control the DNA-damage response.

Authors:  Sofia Francia; Flavia Michelini; Alka Saxena; Dave Tang; Michiel de Hoon; Viviana Anelli; Marina Mione; Piero Carninci; Fabrizio d'Adda di Fagagna
Journal:  Nature       Date:  2012-08-09       Impact factor: 49.962

10.  Psip1/Ledgf p52 binds methylated histone H3K36 and splicing factors and contributes to the regulation of alternative splicing.

Authors:  Madapura M Pradeepa; Heidi G Sutherland; Jernej Ule; Graeme R Grimes; Wendy A Bickmore
Journal:  PLoS Genet       Date:  2012-05-17       Impact factor: 5.917

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  4 in total

1.  The Sm core components of small nuclear ribonucleoproteins promote homologous recombination repair.

Authors:  Yanqiu Li; Mary Bridget Kardell; Feifei Wang; Ling Wang; Songli Zhu; Tadayoshi Bessho; Aimin Peng
Journal:  DNA Repair (Amst)       Date:  2021-11-02

2.  RNA transcripts stimulate homologous recombination by forming DR-loops.

Authors:  Jian Ouyang; Tribhuwan Yadav; Jia-Min Zhang; Haibo Yang; Esther Rheinbay; Hongshan Guo; Daniel A Haber; Li Lan; Lee Zou
Journal:  Nature       Date:  2021-05-12       Impact factor: 69.504

3.  FMRP promotes transcription-coupled homologous recombination via facilitating TET1-mediated m5C RNA modification demethylation.

Authors:  Haibo Yang; Yumin Wang; Yufei Xiang; Tribhuwan Yadav; Jian Ouyang; Laiyee Phoon; Xueping Zhu; Yi Shi; Lee Zou; Li Lan
Journal:  Proc Natl Acad Sci U S A       Date:  2022-03-15       Impact factor: 12.779

Review 4.  Mitochondria, Oxidative Stress and the Kynurenine System, with a Focus on Ageing and Neuroprotection.

Authors:  Katalin Sas; Elza Szabó; László Vécsei
Journal:  Molecules       Date:  2018-01-17       Impact factor: 4.411

  4 in total

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