Literature DB >> 29073094

Mechanistic principles underlying regulation of the actin cytoskeleton by phosphoinositides.

Yosuke Senju1, Maria Kalimeri2, Essi V Koskela1, Pentti Somerharju3, Hongxia Zhao1, Ilpo Vattulainen2,4, Pekka Lappalainen5.   

Abstract

The actin cytoskeleton powers membrane deformation during many cellular processes, such as migration, morphogenesis, and endocytosis. Membrane phosphoinositides, especially phosphatidylinositol 4,5-bisphosphate [PI(4,5)P2], regulate the activities of many actin-binding proteins (ABPs), including profilin, cofilin, Dia2, N-WASP, ezrin, and moesin, but the underlying molecular mechanisms have remained elusive. Moreover, because of a lack of available methodology, the dynamics of membrane interactions have not been experimentally determined for any ABP. Here, we applied a combination of biochemical assays, photobleaching/activation approaches, and atomistic molecular dynamics simulations to uncover the molecular principles by which ABPs interact with phosphoinositide-rich membranes. We show that, despite using different domains for lipid binding, these proteins associate with membranes through similar multivalent electrostatic interactions, without specific binding pockets or penetration into the lipid bilayer. Strikingly, our experiments reveal that these proteins display enormous differences in the dynamics of membrane interactions and in the ranges of phosphoinositide densities that they sense. Profilin and cofilin display transient, low-affinity interactions with phosphoinositide-rich membranes, whereas F-actin assembly factors Dia2 and N-WASP reside on phosphoinositide-rich membranes for longer periods to perform their functions. Ezrin and moesin, which link the actin cytoskeleton to the plasma membrane, bind membranes with very high affinity and slow dissociation dynamics. Unlike profilin, cofilin, Dia2, and N-WASP, they do not require high "stimulus-responsive" phosphoinositide density for membrane binding. Moreover, ezrin can limit the lateral diffusion of PI(4,5)P2 along the lipid bilayer. Together, these findings demonstrate that membrane-interaction mechanisms of ABPs evolved to precisely fulfill their specific functions in cytoskeletal dynamics. Published under the PNAS license.

Entities:  

Keywords:  actin cytoskeleton; molecular dynamics simulations; phosphoinositides; protein–lipid interactions; signal transduction

Mesh:

Substances:

Year:  2017        PMID: 29073094      PMCID: PMC5664496          DOI: 10.1073/pnas.1705032114

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  63 in total

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3.  ADF/cofilin binds phosphoinositides in a multivalent manner to act as a PIP(2)-density sensor.

Authors:  Hongxia Zhao; Markku Hakala; Pekka Lappalainen
Journal:  Biophys J       Date:  2010-05-19       Impact factor: 4.033

4.  Phospholipids regulate localization and activity of mDia1 formin.

Authors:  Nagendran Ramalingam; Hongxia Zhao; Dennis Breitsprecher; Pekka Lappalainen; Jan Faix; Michael Schleicher
Journal:  Eur J Cell Biol       Date:  2010-10       Impact factor: 4.492

5.  Structure/function analysis of the interaction of phosphatidylinositol 4,5-bisphosphate with actin-capping protein: implications for how capping protein binds the actin filament.

Authors:  Kyoungtae Kim; Michelle E McCully; Nandini Bhattacharya; Boyd Butler; David Sept; John A Cooper
Journal:  J Biol Chem       Date:  2006-12-19       Impact factor: 5.157

6.  Inhibition of the interactions of cofilin, destrin, and deoxyribonuclease I with actin by phosphoinositides.

Authors:  N Yonezawa; E Nishida; K Iida; I Yahara; H Sakai
Journal:  J Biol Chem       Date:  1990-05-25       Impact factor: 5.157

7.  Optimization of the additive CHARMM all-atom protein force field targeting improved sampling of the backbone φ, ψ and side-chain χ(1) and χ(2) dihedral angles.

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Journal:  J Chem Theory Comput       Date:  2012-07-18       Impact factor: 6.006

8.  Solution structure of human cofilin: actin binding, pH sensitivity, and relationship to actin-depolymerizing factor.

Authors:  Brian J Pope; Karen M Zierler-Gould; Ronald Kühne; Alan G Weeds; Linda J Ball
Journal:  J Biol Chem       Date:  2003-11-18       Impact factor: 5.157

9.  Mechanism of N-WASP activation by CDC42 and phosphatidylinositol 4, 5-bisphosphate.

Authors:  R Rohatgi; H Y Ho; M W Kirschner
Journal:  J Cell Biol       Date:  2000-09-18       Impact factor: 10.539

10.  Structural insights into the inhibition of actin-capping protein by interactions with phosphatidic acid and phosphatidylinositol (4,5)-bisphosphate.

Authors:  Roman Pleskot; Přemysl Pejchar; Viktor Žárský; Christopher J Staiger; Martin Potocký
Journal:  PLoS Comput Biol       Date:  2012-11-01       Impact factor: 4.475

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  36 in total

1.  Structural and signaling role of lipids in plasma membrane repair.

Authors:  Adam Horn; Jyoti K Jaiswal
Journal:  Curr Top Membr       Date:  2019-07-25       Impact factor: 3.049

Review 2.  Profilin: many facets of a small protein.

Authors:  Rhonda J Davey; Pierre Dj Moens
Journal:  Biophys Rev       Date:  2020-07-13

Review 3.  Polyphosphoinositide-Binding Domains: Insights from Peripheral Membrane and Lipid-Transfer Proteins.

Authors:  Joshua G Pemberton; Tamas Balla
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Journal:  Proc Natl Acad Sci U S A       Date:  2019-01-16       Impact factor: 11.205

5.  Characterization of Lipid-Protein Interactions and Lipid-Mediated Modulation of Membrane Protein Function through Molecular Simulation.

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Review 6.  Regulation of actin assembly by PI(4,5)P2 and other inositol phospholipids: An update on possible mechanisms.

Authors:  Paul A Janmey; Robert Bucki; Ravi Radhakrishnan
Journal:  Biochem Biophys Res Commun       Date:  2018-08-13       Impact factor: 3.575

7.  Molecular mechanism for inhibition of twinfilin by phosphoinositides.

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Journal:  J Biol Chem       Date:  2018-02-07       Impact factor: 5.157

8.  Computer simulations of protein-membrane systems.

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9.  Lateral distribution of phosphatidylinositol 4,5-bisphosphate in membranes regulates formin- and ARP2/3-mediated actin nucleation.

Authors:  Robert Bucki; Yu-Hsiu Wang; Changsong Yang; Sreeja Kutti Kandy; Ololade Fatunmbi; Ryan Bradley; Katarzyna Pogoda; Tatyana Svitkina; Ravi Radhakrishnan; Paul A Janmey
Journal:  J Biol Chem       Date:  2019-01-28       Impact factor: 5.157

Review 10.  Cofilin and profilin: partners in cancer aggressiveness.

Authors:  Joelle V F Coumans; Rhonda J Davey; Pierre D J Moens
Journal:  Biophys Rev       Date:  2018-07-19
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