Literature DB >> 29071369

Erlang flow of hydrophilic pore formation and closure events in a lipid bilayer during phase transition resulting from diffusion in the radius space.

A A Anosov1,2, A A Sharakshane3, E Yu Smirnova4, O Yu Nemchenko4.   

Abstract

The Smoluchowski equation with an energy profile of a special type and an assumed hydrophobic ("half") pore source term is used to describe the process of hydrophilic pore formation in a lipid bilayer at the gel-liquid phase transition. The source term reflects the occurrence of molecule packing defects in a lipid bilayer at phase transition. The time sequences of the pore formation and closure events are treated as non-stationary, second-order Erlang flows whose characteristics depend on the equation solution. The computed distributions of the time intervals between hydrophilic pores, and pore lifetimes agree with the previously published experimental interpulse interval and pulse duration histograms for the current fluctuations through planar bilayer membranes of DPPC immersed in a LiCl aqueous solution containing polyethylene glycol. Thus, the statistical analysis of pore formation and closure times leads us to conclude that firstly, the increased permeability of a lipid bilayer during the gel-liquid phase transition is accounted for by the emergence of additional hydrophobic defects in the heterogeneous structure of the bilayer and secondly, that the non-exponential distributions of the lipid channel closed and open times observed in experiments are evidence that the process of hydrophilic pore formation is not a one-step process but involves at least two dependent events.

Entities:  

Keywords:  Bilayer permeability; Hydrophilic pore; Hydrophobic pore; Phase transition; Smoluchowski equation; Toroidal pore

Mesh:

Substances:

Year:  2017        PMID: 29071369     DOI: 10.1007/s00249-017-1261-3

Source DB:  PubMed          Journal:  Eur Biophys J        ISSN: 0175-7571            Impact factor:   1.733


  24 in total

1.  Simulation of pore formation in lipid bilayers by mechanical stress and electric fields.

Authors:  D Peter Tieleman; Hari Leontiadou; Alan E Mark; Siewert-Jan Marrink
Journal:  J Am Chem Soc       Date:  2003-05-28       Impact factor: 15.419

2.  Model of creation and evolution of stable electropores for DNA delivery.

Authors:  Kyle C Smith; John C Neu; Wanda Krassowska
Journal:  Biophys J       Date:  2004-05       Impact factor: 4.033

3.  Nucleation free energy of pore formation in an amphiphilic bilayer studied by molecular dynamics simulations.

Authors:  T V Tolpekina; W K den Otter; W J Briels
Journal:  J Chem Phys       Date:  2004-12-15       Impact factor: 3.488

4.  Free energy of a trans-membrane pore calculated from atomistic molecular dynamics simulations.

Authors:  J Wohlert; W K den Otter; O Edholm; W J Briels
Journal:  J Chem Phys       Date:  2006-04-21       Impact factor: 3.488

5.  Phase-state dependent current fluctuations in pure lipid membranes.

Authors:  B Wunderlich; C Leirer; A-L Idzko; U F Keyser; A Wixforth; V M Myles; T Heimburg; M F Schneider
Journal:  Biophys J       Date:  2009-06-03       Impact factor: 4.033

6.  Pore disappearance in a cell after electroporation: theoretical simulation and comparison with experiments.

Authors:  G Saulis
Journal:  Biophys J       Date:  1997-09       Impact factor: 4.033

7.  Reversible electrical breakdown of lipid bilayers: formation and evolution of pores.

Authors:  R W Glaser; S L Leikin; L V Chernomordik; V F Pastushenko; A I Sokirko
Journal:  Biochim Biophys Acta       Date:  1988-05-24

8.  Local and transient permeation events are associated with local melting of giant liposomes.

Authors:  Thomas Andersen; Anders Kyrsting; Poul M Bendix
Journal:  Soft Matter       Date:  2014-06-28       Impact factor: 3.679

9.  Kinetics, statistics, and energetics of lipid membrane electroporation studied by molecular dynamics simulations.

Authors:  Rainer A Böckmann; Bert L de Groot; Sergej Kakorin; Eberhard Neumann; Helmut Grubmüller
Journal:  Biophys J       Date:  2008-05-09       Impact factor: 4.033

10.  Visualization of domain formation in the inner and outer leaflets of a phospholipid bilayer.

Authors:  D M Haverstick; M Glaser
Journal:  J Cell Biol       Date:  1988-06       Impact factor: 10.539

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