Literature DB >> 29071169

Draft genome sequence of a thermostable, alkaliphilic α-amylase and protease producing Bacillus amyloliquefaciens strain KCP2.

Vimalkumar S Prajapati1, Sanket Ray2, Jitendra Narayan3, Chaitanya C Joshi4, Kamlesh C Patel2, Ujjval B Trivedi2, R M Patel1.   

Abstract

Bacillus amyloliquefaciens strain KCP2 was isolated from municipal food waste samples collected in Vallabh Vidyanagar, Gujarat, India. Strain KCP2 is noteworthy due to its ability to produce a thermostable, alkaliphilic α-amylase and a protease. These enzymes have importance in several industrial processes including bread making, brewing, starch processing, pharmacy, and textile industries. Whole genome sequencing of strain KCP2 showed that the estimated genome size was 3.9 Mb, the G + C content was 46%, and it coded for 4113 genes.

Entities:  

Keywords:  Amylases; Bacillus amyloliquefaciens; Ion torrent; NGS; Protease; Whole genome sequencing

Year:  2017        PMID： 29071169      PMCID： PMC5640519          DOI： 10.1007/s13205-017-1005-1

Source DB:  PubMed          Journal:  3 Biotech        ISSN： 2190-5738            Impact factor:   2.406


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Authors:  Anton Bankevich; Sergey Nurk; Dmitry Antipov; Alexey A Gurevich; Mikhail Dvorkin; Alexander S Kulikov; Valery M Lesin; Sergey I Nikolenko; Son Pham; Andrey D Prjibelski; Alexey V Pyshkin; Alexander V Sirotkin; Nikolay Vyahhi; Glenn Tesler; Max A Alekseyev; Pavel A Pevzner
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Authors:  Felipe A Simão; Robert M Waterhouse; Panagiotis Ioannidis; Evgenia V Kriventseva; Evgeny M Zdobnov
Journal:  Bioinformatics       Date:  2015-06-09       Impact factor: 6.937

4.  Relationship of Bacillus amyloliquefaciens clades associated with strains DSM 7T and FZB42T: a proposal for Bacillus amyloliquefaciens subsp. amyloliquefaciens subsp. nov. and Bacillus amyloliquefaciens subsp. plantarum subsp. nov. based on complete genome sequence comparisons.

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Journal:  Int J Syst Evol Microbiol       Date:  2010-09-03       Impact factor: 2.747

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6.  Pollux: platform independent error correction of single and mixed genomes.

Authors:  Eric Marinier; Daniel G Brown; Brendan J McConkey
Journal:  BMC Bioinformatics       Date:  2015-01-16       Impact factor: 3.169

7.  A statistical approach for the production of thermostable and alklophilic alpha-amylase from Bacillus amyloliquefaciens KCP2 under solid-state fermentation.

Authors:  Vimal S Prajapati; Ujjval B Trivedi; Kamlesh C Patel
Journal:  3 Biotech       Date:  2014-04-11       Impact factor: 2.406

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Journal:  Nucleic Acids Res       Date:  2016-06-24       Impact factor: 16.971
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1.  Isolation, identification, and whole-genome sequencing of high-yield protease bacteria from Daqu of ZhangGong Laojiu.

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Journal:  PLoS One       Date:  2022-04-26       Impact factor: 3.240

Review 2.  A Review on the Biotechnological Applications of the Operational Group Bacillus amyloliquefaciens.

Authors:  Mohamad Syazwan Ngalimat; Radin Shafierul Radin Yahaya; Mohamad Malik Al-Adil Baharudin; Syafiqah Mohd Yaminudin; Murni Karim; Siti Aqlima Ahmad; Suriana Sabri
Journal:  Microorganisms       Date:  2021-03-17
  2 in total

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