Literature DB >> 29064677

Characterization and Elimination of Undesirable Protein Residues in Plant Cell Wall Materials for Enhancing Lignin Analysis by Solution-State Nuclear Magnetic Resonance Spectroscopy.

Hoon Kim1,2, Dharshana Padmakshan2, Yanding Li2,3, Jorge Rencoret4, Ronald D Hatfield5, John Ralph1,2,3.   

Abstract

Protein polymers exist in every plant cell wall preparation, and they interfere with lignin characterization and quantification. Here, we report the structural characterization of the residual protein peaks in 2D NMR spectra in corn cob and kenaf samples and note that aromatic amino acids are ubiquitous and evident in spectra from various other plants and tissues. The aromatic correlations from amino acid residues were identified and assigned as phenylalanine and tyrosine. Phenylalanine's 3/5 correlation peak is superimposed on the peak from typical lignin p-hydroxyphenyl (H-unit) structures, causing an overestimation of the H units. Protein contamination also occurs when using cellulases to prepare enzyme lignins from virtually protein-free wood samples. We used a protease to remove the protein residues from the ball-milled cell walls, and we were able to reveal H-unit structures in lignins more clearly in the 2D NMR spectra, providing a better basis for their estimation.

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Year:  2017        PMID: 29064677     DOI: 10.1021/acs.biomac.7b01223

Source DB:  PubMed          Journal:  Biomacromolecules        ISSN: 1525-7797            Impact factor:   6.988


  19 in total

1.  Compensatory Guaiacyl Lignin Biosynthesis at the Expense of Syringyl Lignin in 4CL1-Knockout Poplar.

Authors:  Chung-Jui Tsai; Peng Xu; Liang-Jiao Xue; Hao Hu; Batbayar Nyamdari; Radnaa Naran; Xiaohong Zhou; Geert Goeminne; Ruili Gao; Erica Gjersing; Joseph Dahlen; Sivakumar Pattathil; Michael G Hahn; Mark F Davis; John Ralph; Wout Boerjan; Scott A Harding
Journal:  Plant Physiol       Date:  2020-03-05       Impact factor: 8.340

2.  Catalytic Hydrogenolysis of Lignin: The Influence of Minor Units and Saccharides.

Authors:  Zhiwen Wang; Peter J Deuss
Journal:  ChemSusChem       Date:  2021-09-20       Impact factor: 9.140

3.  H-lignin can be deposited independently of CINNAMYL ALCOHOL DEHYDROGENASE C and D in Arabidopsis.

Authors:  Fabiola Muro-Villanueva; Hoon Kim; John Ralph; Clint Chapple
Journal:  Plant Physiol       Date:  2022-08-01       Impact factor: 8.005

4.  Commelinid Monocotyledon Lignins Are Acylated by p-Coumarate.

Authors:  Steven D Karlen; Heather C A Free; Dharshana Padmakshan; Bronwen G Smith; John Ralph; Philip J Harris
Journal:  Plant Physiol       Date:  2018-05-03       Impact factor: 8.340

5.  Manipulation of Lignin Monomer Composition Combined with the Introduction of Monolignol Conjugate Biosynthesis Leads to Synergistic Changes in Lignin Structure.

Authors:  Rebecca A Smith; Fachuang Lu; Fabiola Muro-Villanueva; Joanne C Cusumano; Clint Chapple; John Ralph
Journal:  Plant Cell Physiol       Date:  2022-06-15       Impact factor: 4.937

6.  Suppression of a single BAHD gene in Setaria viridis causes large, stable decreases in cell wall feruloylation and increases biomass digestibility.

Authors:  Wagner R de Souza; Polyana K Martins; Jackie Freeman; Till K Pellny; Louise V Michaelson; Bruno L Sampaio; Felipe Vinecky; Ana P Ribeiro; Barbara A D B da Cunha; Adilson K Kobayashi; Patricia A de Oliveira; Raquel B Campanha; Thályta F Pacheco; Danielly C I Martarello; Rogério Marchiosi; Osvaldo Ferrarese-Filho; Wanderley D Dos Santos; Robson Tramontina; Fabio M Squina; Danilo C Centeno; Marília Gaspar; Marcia R Braga; Marco A S Tiné; John Ralph; Rowan A C Mitchell; Hugo B C Molinari
Journal:  New Phytol       Date:  2018-01-08       Impact factor: 10.151

7.  Mechanistic insight in the selective delignification of wheat straw by three white-rot fungal species through quantitative 13C-IS py-GC-MS and whole cell wall HSQC NMR.

Authors:  Gijs van Erven; Nazri Nayan; Anton S M Sonnenberg; Wouter H Hendriks; John W Cone; Mirjam A Kabel
Journal:  Biotechnol Biofuels       Date:  2018-09-26       Impact factor: 6.040

8.  Silencing of a BAHD acyltransferase in sugarcane increases biomass digestibility.

Authors:  Wagner Rodrigo de Souza; Thályta Fraga Pacheco; Karoline Estefani Duarte; Bruno Leite Sampaio; Patrícia Abrão de Oliveira Molinari; Polyana Kelly Martins; Thaís Ribeiro Santiago; Eduardo Fernandes Formighieri; Felipe Vinecky; Ana Paula Ribeiro; Bárbara Andrade Dias Brito da Cunha; Adilson Kenji Kobayashi; Rowan Andrew Craig Mitchell; Dasciana de Sousa Rodrigues Gambetta; Hugo Bruno Correa Molinari
Journal:  Biotechnol Biofuels       Date:  2019-05-06       Impact factor: 6.040

9.  An "ideal lignin" facilitates full biomass utilization.

Authors:  Yanding Li; Li Shuai; Hoon Kim; Ali Hussain Motagamwala; Justin K Mobley; Fengxia Yue; Yuki Tobimatsu; Daphna Havkin-Frenkel; Fang Chen; Richard A Dixon; Jeremy S Luterbacher; James A Dumesic; John Ralph
Journal:  Sci Adv       Date:  2018-09-28       Impact factor: 14.136

Review 10.  Halophiles and Their Vast Potential in Biofuel Production.

Authors:  Mohammad Ali Amoozegar; Atefeh Safarpour; Kambiz Akbari Noghabi; Tala Bakhtiary; Antonio Ventosa
Journal:  Front Microbiol       Date:  2019-08-22       Impact factor: 5.640

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