Literature DB >> 29062476

Building Diversified Multiple Trees for classification in high dimensional noisy biomedical data.

Jiuyong Li1, Lin Liu1, Jixue Liu1, Ryan Green1.   

Abstract

PURPOSE: It is common that a trained classification model is applied to the operating data that is deviated from the training data because of noise. This paper will test an ensemble method, Diversified Multiple Tree (DMT), on its capability for classifying instances in a new laboratory using the classifier built on the instances of another laboratory.
METHODS: DMT is tested on three real world biomedical data sets from different laboratories in comparison with four benchmark ensemble methods, AdaBoost, Bagging, Random Forests, and Random Trees. Experiments have also been conducted on studying the limitation of DMT and its possible variations.
RESULTS: Experimental results show that DMT is significantly more accurate than other benchmark ensemble classifiers on classifying new instances of a different laboratory from the laboratory where instances are used to build the classifier.
CONCLUSIONS: This paper demonstrates that an ensemble classifier, DMT, is more robust in classifying noisy data than other widely used ensemble methods. DMT works on the data set that supports multiple simple trees.

Keywords:  Decision tree; Diversified Multiple Tree; Ensemble classifier; Noisy data; Robustness

Year:  2017        PMID: 29062476      PMCID: PMC5634968          DOI: 10.1007/s13755-017-0025-x

Source DB:  PubMed          Journal:  Health Inf Sci Syst        ISSN: 2047-2501


  9 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  2001-11-13       Impact factor: 11.205

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Authors:  M E Garber; O G Troyanskaya; K Schluens; S Petersen; Z Thaesler; M Pacyna-Gengelbach; M van de Rijn; G D Rosen; C M Perou; R I Whyte; R B Altman; P O Brown; D Botstein; I Petersen
Journal:  Proc Natl Acad Sci U S A       Date:  2001-11-13       Impact factor: 11.205

6.  A two-gene expression ratio predicts clinical outcome in breast cancer patients treated with tamoxifen.

Authors:  Xiao-Jun Ma; Zuncai Wang; Paula D Ryan; Steven J Isakoff; Anne Barmettler; Andrew Fuller; Beth Muir; Gayatry Mohapatra; Ranelle Salunga; J Todd Tuggle; Yen Tran; Diem Tran; Ana Tassin; Paul Amon; Wilson Wang; Wei Wang; Edward Enright; Kimberly Stecker; Eden Estepa-Sabal; Barbara Smith; Jerry Younger; Ulysses Balis; James Michaelson; Atul Bhan; Karleen Habin; Thomas M Baer; Joan Brugge; Daniel A Haber; Mark G Erlander; Dennis C Sgroi
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8.  Gene-expression profiles predict survival of patients with lung adenocarcinoma.

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Journal:  Nat Med       Date:  2002-07-15       Impact factor: 53.440

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Authors:  Dinesh Singh; Phillip G Febbo; Kenneth Ross; Donald G Jackson; Judith Manola; Christine Ladd; Pablo Tamayo; Andrew A Renshaw; Anthony V D'Amico; Jerome P Richie; Eric S Lander; Massimo Loda; Philip W Kantoff; Todd R Golub; William R Sellers
Journal:  Cancer Cell       Date:  2002-03       Impact factor: 31.743

  9 in total
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1.  Guest editorial: special issue on "Artificial Intelligence in Health and Medicine".

Authors:  Siuly Siuly; Runhe Huang; Mahmoud Daneshmand
Journal:  Health Inf Sci Syst       Date:  2018-01-16
  1 in total

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