Literature DB >> 29061041

Proteomic and Metaproteomic Approaches to Understand Host-Microbe Interactions.

Amanda E Starr1, Shelley A Deeke1, Leyuan Li1, Xu Zhang1, Rachid Daoud1, James Ryan1, Zhibin Ning1, Kai Cheng1, Linh V H Nguyen1, Elias Abou-Samra1, Mathieu Lavallée-Adam1, Daniel Figeys1,2,3.   

Abstract

Mesh:

Year:  2017        PMID: 29061041     DOI: 10.1021/acs.analchem.7b04340

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


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  12 in total

Review 1.  Progress on Identifying and Characterizing the Human Proteome: 2018 Metrics from the HUPO Human Proteome Project.

Authors:  Gilbert S Omenn; Lydie Lane; Christopher M Overall; Fernando J Corrales; Jochen M Schwenk; Young-Ki Paik; Jennifer E Van Eyk; Siqi Liu; Michael Snyder; Mark S Baker; Eric W Deutsch
Journal:  J Proteome Res       Date:  2018-08-23       Impact factor: 4.466

Review 2.  Metaproteomics of the human gut microbiota: Challenges and contributions to other OMICS.

Authors:  Ngom Issa Isaac; Decloquement Philippe; Armstrong Nicholas; Didier Raoult; Chabrière Eric
Journal:  Clin Mass Spectrom       Date:  2019-06-04

Review 3.  Ecosystem-specific microbiota and microbiome databases in the era of big data.

Authors:  Victor Lobanov; Angélique Gobet; Alyssa Joyce
Journal:  Environ Microbiome       Date:  2022-07-16

4.  How does the early life environment influence the oral microbiome and determine oral health outcomes in childhood?

Authors:  Christina Jane Adler; Kim-Anh Lê Cao; Toby Hughes; Piyush Kumar; Christine Austin
Journal:  Bioessays       Date:  2021-06-20       Impact factor: 4.653

5.  Evaluating the potential of residual Pap test fluid as a resource for the metaproteomic analysis of the cervical-vaginal microbiome.

Authors:  Somaieh Afiuni-Zadeh; Kristin L M Boylan; Pratik D Jagtap; Timothy J Griffin; Joel D Rudney; Marnie L Peterson; Amy P N Skubitz
Journal:  Sci Rep       Date:  2018-07-18       Impact factor: 4.379

Review 6.  Advancing functional and translational microbiome research using meta-omics approaches.

Authors:  Xu Zhang; Leyuan Li; James Butcher; Alain Stintzi; Daniel Figeys
Journal:  Microbiome       Date:  2019-12-06       Impact factor: 14.650

Review 7.  Inferring microbiota functions from taxonomic genes: a review.

Authors:  Christophe Djemiel; Pierre-Alain Maron; Sébastien Terrat; Samuel Dequiedt; Aurélien Cottin; Lionel Ranjard
Journal:  Gigascience       Date:  2022-01-12       Impact factor: 6.524

8.  Bacterial low-abundant taxa are key determinants of a healthy airway metagenome in the early years of human life.

Authors:  Marie-Madlen Pust; Burkhard Tümmler
Journal:  Comput Struct Biotechnol J       Date:  2021-12-15       Impact factor: 7.271

9.  ProteoClade: A taxonomic toolkit for multi-species and metaproteomic analysis.

Authors:  Arshag D Mooradian; Sjoerd van der Post; Kristen M Naegle; Jason M Held
Journal:  PLoS Comput Biol       Date:  2020-03-09       Impact factor: 4.475

Review 10.  Metaproteomics to Decipher CF Host-Microbiota Interactions: Overview, Challenges and Future Perspectives.

Authors:  Pauline Hardouin; Raphael Chiron; Hélène Marchandin; Jean Armengaud; Lucia Grenga
Journal:  Genes (Basel)       Date:  2021-06-09       Impact factor: 4.096

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