Literature DB >> 29054012

The role of long noncoding RNAs in cancer: the dark matter matters.

Xiaowen Hu1, Anil K Sood2, Chi V Dang3, Lin Zhang4.   

Abstract

Sequencing technology has facilitated a new era of cancer research, especially in cancer genomics. Using next-generation sequencing, thousands of long noncoding RNAs (lncRNAs) have been identified as abnormally altered in the cancer genome or differentially expressed in tumor tissues. These lncRNAs are associated with imbalanced gene regulation and aberrant biological processes that contribute to malignant transformation. The functions and therapeutic potential of cancer-related lncRNAs have attracted considerable interest in the past few years. Although few lncRNAs have been well-characterized, researchers have recently made impressive progress in understanding lncRNAs and their novel functions, such as regulation of gene expression, metabolism and DNA repair. These latest findings reinforce the crucial roles of lncRNAs in cancer initiation and development, as well as their possible clinical applications.
Copyright © 2017 Elsevier Ltd. All rights reserved.

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Year:  2017        PMID: 29054012      PMCID: PMC5869075          DOI: 10.1016/j.gde.2017.10.004

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   5.578


  54 in total

Review 1.  Molecular mechanisms of long noncoding RNAs.

Authors:  Kevin C Wang; Howard Y Chang
Journal:  Mol Cell       Date:  2011-09-16       Impact factor: 17.970

2.  Characterization of HULC, a novel gene with striking up-regulation in hepatocellular carcinoma, as noncoding RNA.

Authors:  Katrin Panzitt; Marisa M O Tschernatsch; Christian Guelly; Tarek Moustafa; Martin Stradner; Heimo M Strohmaier; Charles R Buck; Helmut Denk; Renée Schroeder; Michael Trauner; Kurt Zatloukal
Journal:  Gastroenterology       Date:  2006-08-14       Impact factor: 22.682

Review 3.  Role of non-coding sequence variants in cancer.

Authors:  Ekta Khurana; Yao Fu; Dimple Chakravarty; Francesca Demichelis; Mark A Rubin; Mark Gerstein
Journal:  Nat Rev Genet       Date:  2016-01-19       Impact factor: 53.242

4.  Long noncoding RNA as modular scaffold of histone modification complexes.

Authors:  Miao-Chih Tsai; Ohad Manor; Yue Wan; Nima Mosammaparast; Jordon K Wang; Fei Lan; Yang Shi; Eran Segal; Howard Y Chang
Journal:  Science       Date:  2010-07-08       Impact factor: 47.728

5.  DD3: a new prostate-specific gene, highly overexpressed in prostate cancer.

Authors:  M J Bussemakers; A van Bokhoven; G W Verhaegh; F P Smit; H F Karthaus; J A Schalken; F M Debruyne; N Ru; W B Isaacs
Journal:  Cancer Res       Date:  1999-12-01       Impact factor: 12.701

6.  The lncRNA SLNCR1 Mediates Melanoma Invasion through a Conserved SRA1-like Region.

Authors:  Karyn Schmidt; Cailin E Joyce; Frank Buquicchio; Adam Brown; Justin Ritz; Robert J Distel; Charles H Yoon; Carl D Novina
Journal:  Cell Rep       Date:  2016-05-19       Impact factor: 9.423

7.  A Long Noncoding RNA Regulates Sister Chromatid Cohesion.

Authors:  Francesco P Marchese; Elena Grossi; Oskar Marín-Béjar; Sanjay Kumar Bharti; Ivan Raimondi; Jovanna González; Dannys Jorge Martínez-Herrera; Alejandro Athie; Alicia Amadoz; Robert M Brosh; Maite Huarte
Journal:  Mol Cell       Date:  2016-07-28       Impact factor: 17.970

8.  The GENCODE v7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression.

Authors:  Thomas Derrien; Rory Johnson; Giovanni Bussotti; Andrea Tanzer; Sarah Djebali; Hagen Tilgner; Gregory Guernec; David Martin; Angelika Merkel; David G Knowles; Julien Lagarde; Lavanya Veeravalli; Xiaoan Ruan; Yijun Ruan; Timo Lassmann; Piero Carninci; James B Brown; Leonard Lipovich; Jose M Gonzalez; Mark Thomas; Carrie A Davis; Ramin Shiekhattar; Thomas R Gingeras; Tim J Hubbard; Cedric Notredame; Jennifer Harrow; Roderic Guigó
Journal:  Genome Res       Date:  2012-09       Impact factor: 9.043

9.  lncRNAs transactivate STAU1-mediated mRNA decay by duplexing with 3' UTRs via Alu elements.

Authors:  Chenguang Gong; Lynne E Maquat
Journal:  Nature       Date:  2011-02-10       Impact factor: 49.962

10.  A ROR1-HER3-lncRNA signalling axis modulates the Hippo-YAP pathway to regulate bone metastasis.

Authors:  Chunlai Li; Shouyu Wang; Zhen Xing; Aifu Lin; Ke Liang; Jian Song; Qingsong Hu; Jun Yao; Zhongyuan Chen; Peter K Park; David H Hawke; Jianwei Zhou; Yan Zhou; Shuxing Zhang; Han Liang; Mien-Chie Hung; Gary E Gallick; Leng Han; Chunru Lin; Liuqing Yang
Journal:  Nat Cell Biol       Date:  2017-01-23       Impact factor: 28.824

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  53 in total

Review 1.  The emerging role of noncoding RNAs in colorectal cancer chemoresistance.

Authors:  Ling Wei; Xingwu Wang; Liyan Lv; Yan Zheng; Nasha Zhang; Ming Yang
Journal:  Cell Oncol (Dordr)       Date:  2019-07-29       Impact factor: 6.730

Review 2.  Long non-coding RNAs (LncRNAs), viral oncogenomics, and aberrant splicing events: therapeutics implications.

Authors:  Rodney Hull; Zukile Mbita; Zodwa Dlamini
Journal:  Am J Cancer Res       Date:  2021-03-01       Impact factor: 6.166

Review 3.  Regulatory function of DNA methylation mediated lncRNAs in gastric cancer.

Authors:  Nan Li; Anqi Zeng; Qian Wang; Maohua Chen; Shaomi Zhu; Linjiang Song
Journal:  Cancer Cell Int       Date:  2022-07-09       Impact factor: 6.429

4.  The lncRNA-DLEU2/miR-186-5p/PDK3 axis promotes the progress of glioma cells.

Authors:  Zuochang Xie; Xiaojian Li; Hua Chen; Ailiang Zeng; Yan Shi; Yong Tang
Journal:  Am J Transl Res       Date:  2019-08-15       Impact factor: 4.060

5.  Noncoding RNA Ginir functions as an oncogene by associating with centrosomal proteins.

Authors:  Suchismita Panda; Meenakshi Setia; Navjot Kaur; Varsha Shepal; Vivek Arora; Divya Kumari Singh; Abir Mondal; Abhishek Teli; Madhura Tathode; Rajendra Gajula; L C Padhy; Anjali Shiras
Journal:  PLoS Biol       Date:  2018-10-08       Impact factor: 8.029

6.  Long non-coding RNA SUMO1P3 may promote cell proliferation, migration, and invasion of pancreatic cancer via EMT signaling pathway.

Authors:  Chuang Tian; Yong Jin; Songshan Shi
Journal:  Oncol Lett       Date:  2018-09-03       Impact factor: 2.967

7.  Competitive Endogenous RNA (ceRNA) Regulation Network of lncRNA-miRNA-mRNA in Colorectal Carcinogenesis.

Authors:  Jingwei Liu; Hao Li; Bowen Zheng; Liping Sun; Yuan Yuan; Chengzhong Xing
Journal:  Dig Dis Sci       Date:  2019-02-07       Impact factor: 3.487

Review 8.  A narrative review of research progress on drug therapies for glioblastoma multiforme.

Authors:  Xiangjin Zheng; Qin Tang; Liwen Ren; Jinyi Liu; Wan Li; Weiqi Fu; Jinhua Wang; Guanhua Du
Journal:  Ann Transl Med       Date:  2021-06

9.  GWAS Links New Variant in Long Non-Coding RNA LINC02006 with Colorectal Cancer Susceptibility.

Authors:  Ewa E Hennig; Anna Kluska; Magdalena Piątkowska; Maria Kulecka; Aneta Bałabas; Natalia Zeber-Lubecka; Krzysztof Goryca; Filip Ambrożkiewicz; Jakub Karczmarski; Tomasz Olesiński; Łukasz Zyskowski; Jerzy Ostrowski
Journal:  Biology (Basel)       Date:  2021-05-25

10.  Development and validation of ferroptosis-related lncRNAs signature for hepatocellular carcinoma.

Authors:  Jiaying Liang; Yaofeng Zhi; Wenhui Deng; Weige Zhou; Xuejun Li; Zheyou Cai; Zhijian Zhu; Jinxiang Zeng; Wanlan Wu; Ying Dong; Jin Huang; Yuzhuo Zhang; Shichao Xu; Yixin Feng; Fuping Ding; Jin Zhang
Journal:  PeerJ       Date:  2021-06-11       Impact factor: 2.984

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