| Literature DB >> 29050276 |
Yuan Liu1, Tao Zhang1, Xiaoqing Zhang2, Ling Ye1, Haitao Gu1, Lin Zhong1, Hongcheng Sun1, Chenlong Song1, Zhihai Peng1, Junwei Fan1.
Abstract
AIM: The purpose of the current study was to investigate individualized therapy of tacrolimus (Tac), as well as complications after liver transplantation (LT) with the known genetic determinants and clinical factors.Entities:
Keywords: CYP3A4; CYP3A5; liver transplantation; new-onset hypertension
Year: 2017 PMID: 29050276 PMCID: PMC5642551 DOI: 10.18632/oncotarget.19606
Source DB: PubMed Journal: Oncotarget ISSN: 1949-2553
Patient demographic data
| All Population | Training Set | Validating Set | |
|---|---|---|---|
| Age (years) | 47.9±9.5 | 46.8±9.0 | 49.0±10.0 |
| Sex: female/male n (%) | 35/135 (20.6/79.4) | 17/83 (17.0/83.0) | 18/52 (25.7/74.3) |
| Weight(kg) | 66.3±12.3 | 68.0±11.5 | 65.0±10.6 |
| Length(m) | 1.70±0.58 | 1.72±0.49 | 1.70±0.61 |
| BMI (kg/m2) | 23.0±3.4 | 23.6±3.6 | 22.7±3.3 |
| Underlying liver disease (n) | |||
| Hepatitis B | 141 | 83 | 58 |
| Hepatitis C | 2 | 1 | 1 |
| Hepatocellular carcinoma | 98 | 61 | 37 |
| Others | 17 | 10 | 7 |
| Hemoglobin (g/l) | 97.6±19.0 | 99.7±14.1 | 94.5±24.2 |
| GPT (U/l) | 47.3±91.3 | 101.5±59.8 | 61.9±117.3 |
| TBL (umol/l) | 48.8±51.5 | 54.8±54.1 | 40.2±47.0 |
| Albumin (g/l) | 36.5±7.4 | 38.0±3.1 | 36.4±8.7 |
| Creatinine (mg/dl) | 65.2±23.0 | 66.4±31.9 | 63.1±17.3 |
| New-onset Diabetes | 32/101 24.1/95.9 | 21/62 25.3/74.7 | 11/39 24.5/75.5 |
| New-onset Hypertension | 24/110 17.9/82.1 | 16/67 19.3/80.7 | 8/43 14.8/85.2 |
| New-onset Hyperlipidemia | 53/97 35.3/74.7 | 31/61 33.7/66.3 | 22/36 34.9/65.1 |
Date was presented with mean value±standard deviation or count (percentage).
BMI: body mass index; GPT: glutamate pyruvate transaminase; TBL: total bilirubin.
Genotype and allele frequency of CYP3A5*3 and CYP3A4*1G polymorphisms in liver transplant donors (n=100) and recipients (n=100) in the training set
| Gene | SNP | Genotype frequency, % (n) | Allele frequency, % (n) | |||
|---|---|---|---|---|---|---|
| Rs2242480 | GG | AG | AA | G | A | |
| Donors # | 0.51 (46) | 0.41 (48) | 0.08 (5) | 0.71 (140) | 0.29 (58) | |
| Recipients | 0.61 (60) | 0.34 (37) | 0.05 (3) | 0.78 (157) | 0.22 (43) | |
| Rs776746 | GG | AG | AA | G | A | |
| Donors # | 0.49 (45) | 0.42 (48) | 0.09 (6) | 0.70 (138) | 0.30 (60) | |
| Recipients | 0.55 (53) | 0.38 (42) | 0.07 (5) | 0.74 (148) | 0.26 (52) | |
# One case with missing genotype.
Comparison of Tac concentration/dose ratios in different groups of donors’ and recipients’ CYP3A5 and CYP3A4 polymorphisms at different times after drug initiation in the training set
| Gene | Locus | Genotype | Week 1 | Week 2 | Week 3 | Week 4 | ||||
|---|---|---|---|---|---|---|---|---|---|---|
| C/D ratios | C/D ratios | C/D ratios | C/D ratios | |||||||
| CYP3A4 | Rs2242480 | GG | 466.83±77.65 | 0.121 | 178.82±27.40 | 0.898 | 160.91±43.83 | 0.278 | 200.81±29.43 | 0.074 |
| Donors | Rs2242480 | AG+AA | 329.65±39.20 | 0.046 | 183.43±23.50 | 0.055 | 211.94±22.18 | 0.015 | 143.22±16.52 | 0.024 |
| CYP3A5 | Rs776746 | GG | 564.87±73.60 | <0.001 | 201.43±26.60 | 0.032 | 234.57±42.81 | 0.048 | 218.48±26.45 | 0.003 |
| Donors | Rs776746 | AG+AA | 252.07±31.63 | 0.014 | 164.44±23.80 | 0.131 | 142.22±22.20 | 0.038 | 125.75±17.08 | 0.123 |
Data was presented as mean±standard deviation. Comparison between groups was performed by t-test. P<0.05 was considered significant.
Comparison of Tac concentration/dose(C/D) ratios in different groups of the numbers of allele A which is a combination of donors’ CYP3A5*3 and recipients’ CYP3A4*1G genotype in the training set
| The number of allele A | N | Week 1 | Week 2 | Week 3 | Week 4 | ||||
|---|---|---|---|---|---|---|---|---|---|
| C/D ratio | p | C/D ratio | p | C/D ratio | p | C/D ratio | p | ||
| <2 | 68 | 217.91±20.69 | <0.001 | 110.66±14.88 | 0.001 | 155.58±26.92 | <0.001 | 138.89±27.82 | 0.082 |
| ≥2 | 32 | 86.41±11.97 | 55.84±6.10 | 49.03±5.93 | 60.49±8.44 | ||||
The data was presented as mean±standard deviation. The comparison between groups was performed by Chi-square. P<0.05 was considered significant.
<2: GGGG, GGGA; ≥2: GGAA, GAAA, AAAA.
Multivariate regression analysis in the training set
| Dependent/explanatory variable | Parameter estimate | Adjust R2 | P/P |
|---|---|---|---|
| Tacrolimus dose (mg/day) | 0.332 | <0.001 | |
| The number of allele A | 0.456 | <0.001 | |
| Hb | 0.274 | 0.005 | |
| TBL | -0.180 | 0.063 | |
| Tacrolimus C0 (ng/ml) | 0.180 | <0.001 | |
| The number of allele A | -0.403 | <0.001 | |
| GPT | 0.162 | 0.080 | |
| Tacrolimus C0/dose (ng/ml/kg) (first week) | 0.266 | <0.001 | |
| The number of allele A | -0.458 | <0.001 | |
| Diabetes | 0.322 | 0.003 | |
| Tacrolimus C0/dose (ng/ml/kg) (second week) | 0.447 | <0.001 | |
| The number of allele A | -0.227 | 0.007 | |
| TBL | 0.637 | <0.001 | |
| Tacrolimus C0/dose (ng/ml/kg) (third week) | 0.131 | 0.001 | |
| The number of allele A | -0.310 | 0.003 | |
| TBL | 0.239 | 0.022 | |
| Tacrolimus C0/dose (ng/ml/kg) (fourth week) | 0.314 | <0.001 | |
| The number of allele A | -0.369 | <0.001 | |
| TBL | 0.306 | 0.003 | |
| Hb | -0.192 | 0.057 | |
| Age | -0.206 | 0.035 |
Data was performed by multivariate linear regression analysis. P<0.05 was considered significant. The number of allele A: combination of donors’ CYP3A5 and recipients’ CYP3A4 genotype; Hb: hemoglobin; GPT: glutamate pyruvate transaminase; TBL: total bilirubin.
Multivariate regression analysis in the validating set
| Dependent/explanatory variable | Parameter estimate | Adjust R2 | P/p |
|---|---|---|---|
| Tacrolimus dose (mg/day) | 0.206 | <0.001 | |
| The number of allele A | 0.395 | 0.001 | |
| TBL | -0.197 | 0.077 | |
| Tacrolimus C0(ng/ml) | 0.207 | <0.001 | |
| The number of allele A | -0.355 | 0.001 | |
| TBL | 0.221 | 0.050 | |
| Age | -0.186 | 0.095 | |
| Tacrolimus C0/dose (ng/ml/kg) (First week) | 0.333 | <0.001 | |
| The number of allele A | -0.400 | <0.001 | |
| TBL | 0.363 | 0.001 | |
| Tacrolimus C0/dose (ng/ml/kg) (Second week) | 0.261 | <0.001 | |
| The number of allele A | -0.164 | 0.131 | |
| TBL | 0.473 | <0.002 | |
| Tacrolimus C0/dose (ng/ml/kg) (Third week) | 0.098 | 0.015 | |
| The number of allele A | -0.281 | 0.023 | |
| TBL | 0.163 | 0.183 | |
| Tacrolimus C0/dose (ng/ml/kg) (Forth week) | 0.078 | 0.018 | |
| The number of allele A | -0.306 | 0.018 |
Data was performed by multivariate linear regression analysis. P<0.05 was considered significant. The number of allele A: combination of donors’ CYP3A5*3 and recipients’ CYP3A4*1G genotype; TBL: total bilirubin.
Figure 1Comparison of weight-corrected Tac dose among the model of donors’ CYP3A5 *3, recipients’ CYP3A4*1G, and TBL, the model of donors’ CYP3A5 *3 and recipients’ CYP3A4*1G, and the model of donors’ CYP3A5 *3 alone
(A-D) The weight-corrected Tac dose at 1–4 weeks after transplant were compared among the model of donors’ CYP3A5*3, recipients’ CYP3A4*1G, and TBL, the model of donors’ CYP3A5*3 and recipients’ CYP3A4*1G, and the model of donors’ CYP3A5*3 alone by using a receiver operating characteristic (ROC) curve. D/W, weight-corrected Tac dose; AUC, area under the curve; *, p < 0.05; **, p < 0.01
Variable PRE_2 ROC curve coordinate point
| Test Variable | Diagnosis point | Sensitivity | 1-Specificity |
|---|---|---|---|
| PRE_2 | 0.0000000 | 1.000 | 1.000 |
| 0.2399369 | 0.977 | 0.905 | |
| 0.2745092 | 0.955 | 0.811 | |
| 0.6493419 | 0.375 | 0.108 | |
| 0.6805440 | 0.375 | 0.095 | |
| 0.8349565 | 0.000 | 0.014 | |
| 1.0000000 | 0.000 | 0.000 |
Data was performed by ROC curve. ROC: recipient operative characteristic
PRE_2: donors’ CYP3A5*3, recipients’ CYP3A4*1G, and TBL.
Analysis of the number of allele A which is combination of donors’ CYP3A5*3 and recipients’ CYP3A4*1G genotype and complication in all population
| The number of allele A | New-onset diabetes | p | New-onset hypertension | p | New-onset hyperlipidemia | p |
|---|---|---|---|---|---|---|
| ≤2 | 29(91.7) | 0.637 | 22(93.3) | <0.001 | 49(92.7) | 0.941 |
| >2 | 3(8.3) | 2(6.7) | 4(7.3) |
The data was presented with count (percentage). The comparison between groups was performed by Chi-square. P<0.05 was considered significant.
≤2: GGGG, GGGA, GGAA; >2: GAAA, AAAA.