Literature DB >> 29042655

Electron transfer pathways in a light, oxygen, voltage (LOV) protein devoid of the photoactive cysteine.

Benita Kopka1, Kathrin Magerl2, Anton Savitsky3, Mehdi D Davari4, Katrin Röllen1, Marco Bocola4, Bernhard Dick2, Ulrich Schwaneberg4,5, Karl-Erich Jaeger1,6, Ulrich Krauss7.   

Abstract

Blue-light absorption by the flavin chromophore in light, oxygen, voltage (LOV) photoreceptors triggers photochemical reactions that lead to the formation of a flavin-cysteine adduct. While it has long been assumed that adduct formation is essential for signaling, it was recently shown that LOV photoreceptor variants devoid of the photoactive cysteine can elicit a functional response and that flavin photoreduction to the neutral semiquinone radical is sufficient for signal transduction. Currently, the mechanistic basis of the underlying electron- (eT) and proton-transfer (pT) reactions is not well understood. We here reengineered pT into the naturally not photoreducible iLOV protein, a fluorescent reporter protein derived from the Arabidopsis thaliana phototropin-2 LOV2 domain. A single amino-acid substitution (Q489D) enabled efficient photoreduction, suggesting that an eT pathway is naturally present in the protein. By using a combination of site-directed mutagenesis, steady-state UV/Vis, transient absorption and electron paramagnetic resonance spectroscopy, we investigate the underlying eT and pT reactions. Our study provides strong evidence that several Tyr and Trp residues, highly conserved in all LOV proteins, constitute the eT pathway for flavin photoreduction, suggesting that the propensity for photoreduction is evolutionary imprinted in all LOV domains, while efficient pT is needed to stabilize the neutral semiquinone radical.

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Year:  2017        PMID: 29042655      PMCID: PMC5645311          DOI: 10.1038/s41598-017-13420-1

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  63 in total

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Authors:  Denis A Proshlyakov
Journal:  Biochim Biophys Acta       Date:  2004-04-12

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Authors:  Kiminori Maeda; Alexander J Robinson; Kevin B Henbest; Hannah J Hogben; Till Biskup; Margaret Ahmad; Erik Schleicher; Stefan Weber; Christiane R Timmel; P J Hore
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-14       Impact factor: 11.205

3.  The photocycle of a flavin-binding domain of the blue light photoreceptor phototropin.

Authors:  T E Swartz; S B Corchnoy; J M Christie; J W Lewis; I Szundi; W R Briggs; R A Bogomolni
Journal:  J Biol Chem       Date:  2001-07-06       Impact factor: 5.157

4.  What makes the difference between a cryptochrome and DNA photolyase? A spectroelectrochemical comparison of the flavin redox transitions.

Authors:  Véronique Balland; Martin Byrdin; Andre P M Eker; Margaret Ahmad; Klaus Brettel
Journal:  J Am Chem Soc       Date:  2009-01-21       Impact factor: 15.419

5.  Quantum Mechanics/Molecular Mechanics Study on the Photoreactions of Dark- and Light-Adapted States of a Blue-Light YtvA LOV Photoreceptor.

Authors:  Xue-Ping Chang; Yuan-Jun Gao; Wei-Hai Fang; Ganglong Cui; Walter Thiel
Journal:  Angew Chem Int Ed Engl       Date:  2017-07-10       Impact factor: 15.336

6.  Switching from adduct formation to electron transfer in a light-oxygen-voltage domain containing the reactive cysteine.

Authors:  Kathrin Magerl; Ivan Stambolic; Bernhard Dick
Journal:  Phys Chem Chem Phys       Date:  2017-05-03       Impact factor: 3.676

7.  A search for radical intermediates in the photocycle of LOV domains.

Authors:  Roger Jan Kutta; Kathrin Magerl; Uwe Kensy; Bernhard Dick
Journal:  Photochem Photobiol Sci       Date:  2015-02       Impact factor: 3.982

8.  Photophysics of the LOV-Based Fluorescent Protein Variant iLOV-Q489K Determined by Simulation and Experiment.

Authors:  Mehdi D Davari; Benita Kopka; Marcus Wingen; Marco Bocola; Thomas Drepper; Karl-Erich Jaeger; Ulrich Schwaneberg; Ulrich Krauss
Journal:  J Phys Chem B       Date:  2016-03-29       Impact factor: 2.991

9.  Singlet oxygen photosensitisation by the fluorescent protein Pp2FbFP L30M, a novel derivative of Pseudomonas putida flavin-binding Pp2FbFP.

Authors:  Joaquim Torra; Andrés Burgos-Caminal; Stephan Endres; Marcus Wingen; Thomas Drepper; Thomas Gensch; Rubén Ruiz-González; Santi Nonell
Journal:  Photochem Photobiol Sci       Date:  2015-02       Impact factor: 3.982

10.  Jalview Version 2--a multiple sequence alignment editor and analysis workbench.

Authors:  Andrew M Waterhouse; James B Procter; David M A Martin; Michèle Clamp; Geoffrey J Barton
Journal:  Bioinformatics       Date:  2009-01-16       Impact factor: 6.937

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  11 in total

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Journal:  Photochem Photobiol Sci       Date:  2021-03-01       Impact factor: 3.982

2.  Light-Mediated Decreases in Cyclic di-GMP Levels Inhibit Structure Formation in Pseudomonas aeruginosa Biofilms.

Authors:  Lisa Juliane Kahl; Alexa Price-Whelan; Lars E P Dietrich
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3.  Unraveling the Mechanism of a LOV Domain Optogenetic Sensor: A Glutamine Lever Induces Unfolding of the Jα Helix.

Authors:  James N Iuliano; Jinnette Tolentino Collado; Agnieszka A Gil; Pavithran T Ravindran; Andras Lukacs; SeungYoun Shin; Helena A Woroniecka; Katrin Adamczyk; James M Aramini; Uthama R Edupuganti; Christopher R Hall; Gregory M Greetham; Igor V Sazanovich; Ian P Clark; Taraneh Daryaee; Jared E Toettcher; Jarrod B French; Kevin H Gardner; Carlos L Simmerling; Stephen R Meech; Peter J Tonge
Journal:  ACS Chem Biol       Date:  2020-09-18       Impact factor: 5.100

4.  Peripheral Methionine Residues Impact Flavin Photoreduction and Protonation in an Engineered LOV Domain Light Sensor.

Authors:  Estella F Yee; Sabine Oldemeyer; Elena Böhm; Abir Ganguly; Darrin M York; Tilman Kottke; Brian R Crane
Journal:  Biochemistry       Date:  2021-03-31       Impact factor: 3.162

5.  The molecular basis of spectral tuning in blue- and red-shifted flavin-binding fluorescent proteins.

Authors:  Katrin Röllen; Joachim Granzin; Alina Remeeva; Mehdi D Davari; Thomas Gensch; Vera V Nazarenko; Kirill Kovalev; Andrey Bogorodskiy; Valentin Borshchevskiy; Stefanie Hemmer; Ulrich Schwaneberg; Valentin Gordeliy; Karl-Erich Jaeger; Renu Batra-Safferling; Ivan Gushchin; Ulrich Krauss
Journal:  J Biol Chem       Date:  2021-04-13       Impact factor: 5.157

6.  Dynamic imaging of cellular pH and redox homeostasis with a genetically encoded dual-functional biosensor, pHaROS, in yeast.

Authors:  Hang Zhao; Yu Zhang; Mingming Pan; Yichen Song; Ling Bai; Yuchen Miao; Yanqin Huang; Xiaohong Zhu; Chun-Peng Song
Journal:  J Biol Chem       Date:  2019-09-05       Impact factor: 5.157

7.  Nuclear spin-hyperpolarization generated in a flavoprotein under illumination: experimental field-dependence and theoretical level crossing analysis.

Authors:  Yonghong Ding; Alexey S Kiryutin; Alexandra V Yurkovskaya; Denis V Sosnovsky; Renad Z Sagdeev; Saskia Bannister; Tilman Kottke; Rajiv K Kar; Igor Schapiro; Konstantin L Ivanov; Jörg Matysik
Journal:  Sci Rep       Date:  2019-12-05       Impact factor: 4.379

8.  Computational Investigation of Structural and Spectroscopic Properties of LOV-Based Proteins with Improved Fluorescence.

Authors:  Felipe Cardoso Ramos; Lorenzo Cupellini; Benedetta Mennucci
Journal:  J Phys Chem B       Date:  2021-02-10       Impact factor: 2.991

9.  QM calculations predict the energetics and infrared spectra of transient glutamine isomers in LOV photoreceptors.

Authors:  Prokopis C Andrikopoulos; Aditya S Chaudhari; Yingliang Liu; Patrick E Konold; John T M Kennis; Bohdan Schneider; Gustavo Fuertes
Journal:  Phys Chem Chem Phys       Date:  2021-06-30       Impact factor: 3.676

10.  Probing the Electron Transfer between iLOV Protein and Ag Nanoparticles.

Authors:  Xia Ran; Qianqian Zhang; Yu Zhang; Jin Chen; Zhongran Wei; Yulu He; Lijun Guo
Journal:  Molecules       Date:  2020-05-29       Impact factor: 4.411

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