Literature DB >> 29036333

Analysis of primary microRNA loci from nascent transcriptomes reveals regulatory domains governed by chromatin architecture.

Maria Bouvy-Liivrand1, Ana Hernández de Sande1, Petri Pölönen1, Juha Mehtonen1, Tapio Vuorenmaa1, Henri Niskanen2, Lasse Sinkkonen3, Minna Unelma Kaikkonen2, Merja Heinäniemi1.   

Abstract

Year:  2017        PMID: 29036333      PMCID: PMC5691356          DOI: 10.1093/nar/gkx909

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


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Nucleic Acids Res (2017) 45 (17): 9837–9849. https://doi.org/10.1093/nar/gkx680 An error was found in the Materials and Methods section of the above paper, where ml was used instead of μl. This has now been corrected online. The Authors would like to apologize for this error.
  5 in total

1.  A microRNA expression and regulatory element activity atlas of the mouse immune system.

Authors:  Samuel A Rose; Aleksandra Wroblewska; Maxime Dhainaut; Hideyuki Yoshida; Jonathan M Shaffer; Anela Bektesevic; Benjamin Ben-Zvi; Andrew Rhoads; Edy Y Kim; Bingfei Yu; Yonit Lavin; Miriam Merad; Jason D Buenrostro; Brian D Brown
Journal:  Nat Immunol       Date:  2021-06-07       Impact factor: 25.606

2.  Sense-antisense miRNA pairs constitute an elaborate reciprocal regulatory circuit.

Authors:  Yulong Song; Lishi Li; Wenbing Yang; Qiang Fu; Wanying Chen; Zeng Fang; Wen Li; Nannan Gu; Rui Zhang
Journal:  Genome Res       Date:  2020-05-18       Impact factor: 9.043

3.  Extensive reprogramming of the nascent transcriptome during iPSC to hepatocyte differentiation.

Authors:  Leena E Viiri; Tommi Rantapero; Mostafa Kiamehr; Anna Alexanova; Mikko Oittinen; Keijo Viiri; Henri Niskanen; Matti Nykter; Minna U Kaikkonen; Katriina Aalto-Setälä
Journal:  Sci Rep       Date:  2019-03-05       Impact factor: 4.379

4.  Rapid and Scalable Profiling of Nascent RNA with fastGRO.

Authors:  Elisa Barbieri; Connor Hill; Mathieu Quesnel-Vallières; Avery J Zucco; Yoseph Barash; Alessandro Gardini
Journal:  Cell Rep       Date:  2020-11-10       Impact factor: 9.423

5.  m6Am-seq reveals the dynamic m6Am methylation in the human transcriptome.

Authors:  Hanxiao Sun; Kai Li; Xiaoting Zhang; Jun'e Liu; Meiling Zhang; Haowei Meng; Chengqi Yi
Journal:  Nat Commun       Date:  2021-08-06       Impact factor: 14.919

  5 in total

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