Literature DB >> 29035203

Developing a Nonstationary Computational Framework With Application to Modeling Dynamic Modulations in Neural Spiking Responses.

Amir Akbarian, Kaiser Niknam, Moahammadbagher Parsa, Kelsey Clark, Behrad Noudoost, Neda Nategh.   

Abstract

OBJECTIVE: This paper aims to develop a computational model that incorporates the functional effects of modulatory covariates (such as context, task, or behavior), which dynamically alter the relationship between the stimulus and the neural response.
METHODS: We develop a general computational approach along with an efficient estimation procedure in the widely used generalized linear model (GLM) framework to characterize such nonstationary dynamics in spiking response and spatiotemporal characteristics of a neuron at the level of individual trials. The model employs a set of modulatory components, which nonlinearly interact with other stimulus-related signals to reproduce such nonstationary effects.
RESULTS: The model is tested for its ability to predict the responses of neurons in the middle temporal cortex of macaque monkeys during an eye movement task. The fitted model proves successful in capturing the fast temporal modulations in the response, reproducing the spike response temporal statistics, and accurately accounting for the neurons' dynamic spatiotemporal sensitivities, during eye movements.
CONCLUSION: The nonstationary GLM framework developed in this study can be used in cases where a time-varying behavioral or cognitive component makes GLM-based models insufficient to describe the dependencies of neural responses on the stimulus-related covariates. SIGNIFICANCE: In addition to being quite powerful in encoding time-varying response modulations, this general framework also enables a readout of the neural code while dissociating the influence of other nonstimulus covariates. This framework will advance our ability to understand sensory processing in higher brain areas when modulated by several behavioral or cognitive variables.

Entities:  

Mesh:

Year:  2017        PMID: 29035203      PMCID: PMC5796416          DOI: 10.1109/TBME.2017.2762687

Source DB:  PubMed          Journal:  IEEE Trans Biomed Eng        ISSN: 0018-9294            Impact factor:   4.538


  41 in total

1.  The time-rescaling theorem and its application to neural spike train data analysis.

Authors:  Emery N Brown; Riccardo Barbieri; Valérie Ventura; Robert E Kass; Loren M Frank
Journal:  Neural Comput       Date:  2002-02       Impact factor: 2.026

2.  An analysis of neural receptive field plasticity by point process adaptive filtering.

Authors:  E N Brown; D P Nguyen; L M Frank; M A Wilson; V Solo
Journal:  Proc Natl Acad Sci U S A       Date:  2001-10-09       Impact factor: 11.205

3.  Rapid task-related plasticity of spectrotemporal receptive fields in primary auditory cortex.

Authors:  Jonathan Fritz; Shihab Shamma; Mounya Elhilali; David Klein
Journal:  Nat Neurosci       Date:  2003-10-28       Impact factor: 24.884

4.  A point process framework for relating neural spiking activity to spiking history, neural ensemble, and extrinsic covariate effects.

Authors:  Wilson Truccolo; Uri T Eden; Matthew R Fellows; John P Donoghue; Emery N Brown
Journal:  J Neurophysiol       Date:  2004-09-08       Impact factor: 2.714

5.  Correlates of motor planning and postsaccadic fixation in the macaque monkey lateral geniculate nucleus.

Authors:  D W Royal; Gy Sáry; J D Schall; V A Casagrande
Journal:  Exp Brain Res       Date:  2005-09-07       Impact factor: 1.972

6.  Eye position effects in monkey cortex. I. Visual and pursuit-related activity in extrastriate areas MT and MST.

Authors:  F Bremmer; U J Ilg; A Thiele; C Distler; K P Hoffmann
Journal:  J Neurophysiol       Date:  1997-02       Impact factor: 2.714

7.  A distinct contribution of the frontal eye field to the visual representation of saccadic targets.

Authors:  Behrad Noudoost; Kelsey L Clark; Tirin Moore
Journal:  J Neurosci       Date:  2014-03-05       Impact factor: 6.167

8.  Dynamics of neuronal firing correlation: modulation of "effective connectivity".

Authors:  A M Aertsen; G L Gerstein; M K Habib; G Palm
Journal:  J Neurophysiol       Date:  1989-05       Impact factor: 2.714

9.  Selective suppression of the magnocellular visual pathway during saccadic eye movements.

Authors:  D C Burr; M C Morrone; J Ross
Journal:  Nature       Date:  1994-10-06       Impact factor: 49.962

10.  Stimulus context alters neural representations of faces in inferotemporal cortex.

Authors:  Behrad Noudoost; Neda Nategh; Kelsey Clark; Hossein Esteky
Journal:  J Neurophysiol       Date:  2016-10-26       Impact factor: 2.714

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  2 in total

1.  Characterizing and dissociating multiple time-varying modulatory computations influencing neuronal activity.

Authors:  Kaiser Niknam; Amir Akbarian; Kelsey Clark; Yasin Zamani; Behrad Noudoost; Neda Nategh
Journal:  PLoS Comput Biol       Date:  2019-09-12       Impact factor: 4.475

2.  A sensory memory to preserve visual representations across eye movements.

Authors:  Amir Akbarian; Kelsey Clark; Behrad Noudoost; Neda Nategh
Journal:  Nat Commun       Date:  2021-11-08       Impact factor: 14.919

  2 in total

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