Literature DB >> 29034292

Salivary lipocalin family proteins from Panstrongylus chinai, a vector of Chagas disease.

Hirotomo Kato1, Ryan C Jochim2, Eduardo A Gomez3, Shunsuke Tsunekawa4, Jesus G Valenzuela2, Yoshihisa Hashiguchi3.   

Abstract

The dataset in this report is related to the research article with the title: "Salivary gland transcripts of the kissing bug, Panstrongylus chinai, a vector of Chagas disease" (Kato et al., 2017) [1]. Lipocalin family proteins were identified as the dominant component in P. chinai saliva, and phylogenetic analysis of the salivary lipocalins resulted in the formation of five major clades. For further characterization, each clade of P. chinai lipocalin was s alignment and phylogenetic analyses together with homologous triatomine lipocalins; pallidipin 2, an inhibitor of collagen-induced platelet aggregation identified from saliva of Triatoma pallidipennis (clade I), pallidipin-like salivary lipocalin from Triatoma dimidiata (clade II), salivary lipocalin from T. dimidiata (clade III), triatin-like salivary lipocalin identified in the saliva of T. dimidiata (clade IV), and lipocalin-like TiLipo37 from Triatoma infestans (clade V).

Entities:  

Keywords:  Lipocalin; Panstrongylus chinai; Saliva; Transcriptome

Year:  2017        PMID: 29034292      PMCID: PMC5635208          DOI: 10.1016/j.dib.2017.09.039

Source DB:  PubMed          Journal:  Data Brief        ISSN: 2352-3409


Specifications Table Value of the data The data is the second report of the salivary lipocalins in a Panstrongylus species. The result will provide further information into the salivary biochemical and pharmacological complexity of triatomine bugs and the evolution of salivary components in blood sucking arthropods. cDNAs and recombinant proteins prepared from these transcripts will result in the discovery of novel pharmacologically active compounds, as well as the development of biomarkers following exposure to Panstrongylus chinai.

Data

The dominant transcripts of Panstrongylus chinai salivary glands were analyzed by sequence analysis of the cDNA library, and 73.7% of transcripts encoding the putative secreted proteins coded for the lipocalin family of proteins [1]. Table 1 shows the grouping of transcripts coding for lipocalin family proteins in P. chinai salivary glands obtained by the phylogenetic analysis [1]. Fig. 1, Fig. 2, Fig. 3, Fig. 4, Fig. 5 represent alignment and phylogenetic analyses of each clade of P. chinai salivary lipocalins together with homologous proteins; pallidipin 2, a platelet aggregation inhibitor identified from Triatoma pallidipennis saliva (clade I), pallidipin-like salivary lipocalin from Triatoma dimidiata saliva with unknown function (clade II), salivary lipocalin from T. dimidiata saliva with unknown function (clade III), triatin-like salivary lipocalin identified in the saliva of T. dimidiata with unknown function (clade IV), and lipocalin-like TiLipo37 from Triatoma infestans saliva with unknown function (clade V), showing their structural similarity and diversity.
Table 1

Transcripts coding for lipocalin family proteins in Panstrongylus chinai salivary glands.

CladeSimilar toNo. of clustersNo. of seq% seq
Clade I
pallidipin 2 (Triatoma pallidipennis): AAA303291615146.9
Td42, similar to pallidipin 2 (Triatoma dimidiata): BAI50842110.3
Clade II
Td38, similar to pallidipin-like salivary lipocalin (Triatoma dimidiata): BAI50839251.6
Td33, similar to pallidipin-like salivary lipocalin (Triatoma dimidiata): BAI50837110.3
Clade III
Td26, similar to salivary lipocalin (Triatoma dimidiata): BAI508312113.4
salivary lipocalin (Triatoma infestans): ABR27920182.4
Td40, similar to triabin-like lipocalin 4a precursor (Triatoma dimidiata): BAI50840130.9
triabin-like lipocalin 4a precursor (Triatoma infestans): ABR27959120.7
salivary lipocalin (Triatoma infestans): ABR27868110.3
Clade IV
Td18, similar to triatin-like salivary lipocalin (Triatoma dimidiata): BAI5082446620.5
Td11, similar to triatin-like salivary lipocalin (Triatoma dimidiata): BAI5081814313.3
Td45, similar to pallidipin-like salivary lipocalin (Triatoma dimidiata): BAI50844182.5
Clade V
lipocalin-like TiLipo37 (Triatoma infestans): AAQ680632103.1
salivary lipocalin (Triatoma brasiliensis): ABH09436161.9
Others
Td24, similar to salivary lipocalin (Triatoma dimidiata): BAI50829220.7
triabin-like salivary lipocalin (Triatoma infestans): ABR27927110.3
salivary lipocalin (Triatoma infestans): ABR27831110.3
salivary lipocalin 1 (Triatoma brasiliensis): ABH09421110.3
Td23, similar to salivary lipocalin (Triatoma dimidiata): BAI50828110.3
Total41322100.0
Fig. 1

(A) Sequence alignment of pallidipin 2-like proteins from Panstrongylus chinai (Pc02, Pc07, Pc08, Pc10-Pc12, Pc14, Pc16 and Pc18-Pc22) together with pallidipin 2 from Triatoma pallidipennis (accession number: AAA30329). Black-shaded amino acids represent identical amino acids and gray-shaded amino acids represent conserved amino acids. Dashes indicate gaps introduced for maximal alignment. Asterisks at the top of the amino acids denote conserved cysteine residues. (B) Phylogenetic tree analysis of pallidipin 2-like proteins (Pc02, Pc07, Pc08, Pc10-Pc12, Pc14, Pc16 and Pc18-Pc22) from P. chinai with pallidipin 2 from T. pallidipennis. The numbers in parentheses indicate the number of transcripts of each contig. The scale bar represents 0.1% divergence. Bootstrap values are shown above branches.

Fig. 2

Sequence alignment of Td38-like proteins from Panstrongylus chinai (Pc85 and Pc156) together with Td38 from Triatoma dimidiata (accession number: AB470389). Black-shaded amino acids represent identical amino acids and gray-shaded amino acids represent conserved amino acids. Dashes indicate gaps introduced for maximal alignment. Asterisks at the top of the amino acids denote conserved cysteine residues.

Fig. 3

(A) Sequence alignment of triafestin-1-like proteins from Panstrongylus chinai (Pc57, Pc64, Pc70, Pc103 and Pc150) together with triafestin-1 from Triatoma infestans (accession number: BAF75464). Black-shaded amino acids represent identical amino acids and gray-shaded amino acids represent conserved amino acids. Dashes indicate gaps introduced for maximal alignment. Asterisks at the top of the amino acids denote conserved cysteine residues, and the GXW motif is indicated by ###. (B) Phylogenetic tree analysis of triafestin-1-like proteins from P. chinai (Pc57, Pc64, Pc70, Pc103 and Pc150) with triafestin-1 from T. infestans. The numbers in parentheses indicate the number of transcripts of each contig. The scale bar represents 0.1% divergence. Bootstrap values are shown above branches.

Fig. 4

(A) Sequence alignment of Td18-like proteins from Panstrongylus chinai (Pc13, Pc15, Pc58 and Pc59) together with Td18 from Triatoma dimidiata (accession number: BAI50824). Black-shaded amino acids represent identical amino acids and gray-shaded amino acids represent conserved amino acids. Dashes indicate gaps introduced for maximal alignment. Asterisks at the top of the amino acids denote conserved cysteine residues, and the GXW motif is indicated by ###. (B) Phylogenetic tree analysis of Td18-like proteins from P. chinai (Pc13, Pc15, Pc58 and Pc59) together with Td18 from T. dimidiata. The numbers in parentheses indicate the number of transcripts of each contig. The scale bar represents 0.05% divergence. Bootstrap values are shown above branches.

Fig. 5

(A) Sequence alignment of lipocalin-like TiLipo37-like proteins from Panstrongylus chinai (Pc41-Pc43) together with lipocalin-like TiLipo37 from Triatoma infestans (accession number: AAQ68063). Black-shaded amino acids represent identical amino acids and gray-shaded amino acids represent conserved amino acids. Dashes indicate gaps introduced for maximal alignment. Asterisks at the top of the amino acids denote conserved cysteine residues, and the GXW motif is indicated by ###. (B) Phylogenetic tree analysis of lipocalin-like TiLipo37-like proteins from P. chinai (Pc41-Pc43) together with lipocalin-like TiLipo37 from T. infestans. The numbers in parentheses indicate the number of transcripts of each contig. The scale bar represents 0.05% divergence. Bootstrap values are shown above branches.

(A) Sequence alignment of pallidipin 2-like proteins from Panstrongylus chinai (Pc02, Pc07, Pc08, Pc10-Pc12, Pc14, Pc16 and Pc18-Pc22) together with pallidipin 2 from Triatoma pallidipennis (accession number: AAA30329). Black-shaded amino acids represent identical amino acids and gray-shaded amino acids represent conserved amino acids. Dashes indicate gaps introduced for maximal alignment. Asterisks at the top of the amino acids denote conserved cysteine residues. (B) Phylogenetic tree analysis of pallidipin 2-like proteins (Pc02, Pc07, Pc08, Pc10-Pc12, Pc14, Pc16 and Pc18-Pc22) from P. chinai with pallidipin 2 from T. pallidipennis. The numbers in parentheses indicate the number of transcripts of each contig. The scale bar represents 0.1% divergence. Bootstrap values are shown above branches. Sequence alignment of Td38-like proteins from Panstrongylus chinai (Pc85 and Pc156) together with Td38 from Triatoma dimidiata (accession number: AB470389). Black-shaded amino acids represent identical amino acids and gray-shaded amino acids represent conserved amino acids. Dashes indicate gaps introduced for maximal alignment. Asterisks at the top of the amino acids denote conserved cysteine residues. (A) Sequence alignment of triafestin-1-like proteins from Panstrongylus chinai (Pc57, Pc64, Pc70, Pc103 and Pc150) together with triafestin-1 from Triatoma infestans (accession number: BAF75464). Black-shaded amino acids represent identical amino acids and gray-shaded amino acids represent conserved amino acids. Dashes indicate gaps introduced for maximal alignment. Asterisks at the top of the amino acids denote conserved cysteine residues, and the GXW motif is indicated by ###. (B) Phylogenetic tree analysis of triafestin-1-like proteins from P. chinai (Pc57, Pc64, Pc70, Pc103 and Pc150) with triafestin-1 from T. infestans. The numbers in parentheses indicate the number of transcripts of each contig. The scale bar represents 0.1% divergence. Bootstrap values are shown above branches. (A) Sequence alignment of Td18-like proteins from Panstrongylus chinai (Pc13, Pc15, Pc58 and Pc59) together with Td18 from Triatoma dimidiata (accession number: BAI50824). Black-shaded amino acids represent identical amino acids and gray-shaded amino acids represent conserved amino acids. Dashes indicate gaps introduced for maximal alignment. Asterisks at the top of the amino acids denote conserved cysteine residues, and the GXW motif is indicated by ###. (B) Phylogenetic tree analysis of Td18-like proteins from P. chinai (Pc13, Pc15, Pc58 and Pc59) together with Td18 from T. dimidiata. The numbers in parentheses indicate the number of transcripts of each contig. The scale bar represents 0.05% divergence. Bootstrap values are shown above branches. (A) Sequence alignment of lipocalin-like TiLipo37-like proteins from Panstrongylus chinai (Pc41-Pc43) together with lipocalin-like TiLipo37 from Triatoma infestans (accession number: AAQ68063). Black-shaded amino acids represent identical amino acids and gray-shaded amino acids represent conserved amino acids. Dashes indicate gaps introduced for maximal alignment. Asterisks at the top of the amino acids denote conserved cysteine residues, and the GXW motif is indicated by ###. (B) Phylogenetic tree analysis of lipocalin-like TiLipo37-like proteins from P. chinai (Pc41-Pc43) together with lipocalin-like TiLipo37 from T. infestans. The numbers in parentheses indicate the number of transcripts of each contig. The scale bar represents 0.05% divergence. Bootstrap values are shown above branches. Transcripts coding for lipocalin family proteins in Panstrongylus chinai salivary glands.

Experimental design, materials and methods

The sequences of P. chinai salivary lipocalins were obtained in the study “Salivary gland transcripts of the kissing bug, Panstrongylus chinai, a vector of Chagas disease” [1]. The sequences coding for lipocalin family of proteins by BLASTx analyses were aligned with CLUSTAL W software [2] and examined using Molecular Evolutionary Genetics Analysis (MEGA) version 5.2 [3]. Phylogenetic trees by the neighbor-joining method were constructed with the distance algorithms available in the MEGA package. Bootstrap values were determined on 1000 replicates of the data sets. Accession numbers of the sequence data are available in “Salivary gland transcripts of the kissing bug, Panstrongylus chinai, a vector of Chagas disease” [1].
Subject areaBiology
More specific subject areaSalivary lipocalins of a hematophagous insect
Type of dataTable, figure
How data was acquiredTranscriptome, alignment and phylogenetic analyses
Data formatAnalyzed
Experimental factorsA dataset of transcripts from salivary grands of Panstrongylus chinai
Experimental featuresAlignment and phylogenetic analyses of salivary lipocalins from Panstrongylus chinai
Data source locationEcuador
Data accessibilityAccession numbers of the sequence data are available in the reference[1].
  3 in total

1.  MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.

Authors:  Koichiro Tamura; Daniel Peterson; Nicholas Peterson; Glen Stecher; Masatoshi Nei; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2011-05-04       Impact factor: 16.240

2.  Salivary gland transcripts of the kissing bug, Panstrongylus chinai, a vector of Chagas disease.

Authors:  Hirotomo Kato; Ryan C Jochim; Eduardo A Gomez; Shunsuke Tsunekawa; Jesus G Valenzuela; Yoshihisa Hashiguchi
Journal:  Acta Trop       Date:  2017-07-06       Impact factor: 3.112

3.  CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.

Authors:  J D Thompson; D G Higgins; T J Gibson
Journal:  Nucleic Acids Res       Date:  1994-11-11       Impact factor: 16.971

  3 in total
  2 in total

1.  Salivary gland transcripts of the kissing bug, Panstrongylus chinai, a vector of Chagas disease.

Authors:  Hirotomo Kato; Ryan C Jochim; Eduardo A Gomez; Shunsuke Tsunekawa; Jesus G Valenzuela; Yoshihisa Hashiguchi
Journal:  Acta Trop       Date:  2017-07-06       Impact factor: 3.112

2.  Salivary and Intestinal Transcriptomes Reveal Differential Gene Expression in Starving, Fed and Trypanosoma cruzi-Infected Rhodnius neglectus.

Authors:  Tamires Marielem Carvalho-Costa; Rafael Destro Rosa Tiveron; Maria Tays Mendes; Cecília Gomes Barbosa; Jessica Coraiola Nevoa; Guilherme Augusto Roza; Marcos Vinícius Silva; Henrique César Pereira Figueiredo; Virmondes Rodrigues; Siomar de Castro Soares; Carlo José Freire Oliveira
Journal:  Front Cell Infect Microbiol       Date:  2021-12-17       Impact factor: 5.293

  2 in total

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