| Literature DB >> 29034292 |
Hirotomo Kato1, Ryan C Jochim2, Eduardo A Gomez3, Shunsuke Tsunekawa4, Jesus G Valenzuela2, Yoshihisa Hashiguchi3.
Abstract
The dataset in this report is related to the research article with the title: "Salivary gland transcripts of the kissing bug, Panstrongylus chinai, a vector of Chagas disease" (Kato et al., 2017) [1]. Lipocalin family proteins were identified as the dominant component in P. chinai saliva, and phylogenetic analysis of the salivary lipocalins resulted in the formation of five major clades. For further characterization, each clade of P. chinai lipocalin was s alignment and phylogenetic analyses together with homologous triatomine lipocalins; pallidipin 2, an inhibitor of collagen-induced platelet aggregation identified from saliva of Triatoma pallidipennis (clade I), pallidipin-like salivary lipocalin from Triatoma dimidiata (clade II), salivary lipocalin from T. dimidiata (clade III), triatin-like salivary lipocalin identified in the saliva of T. dimidiata (clade IV), and lipocalin-like TiLipo37 from Triatoma infestans (clade V).Entities:
Keywords: Lipocalin; Panstrongylus chinai; Saliva; Transcriptome
Year: 2017 PMID: 29034292 PMCID: PMC5635208 DOI: 10.1016/j.dib.2017.09.039
Source DB: PubMed Journal: Data Brief ISSN: 2352-3409
Transcripts coding for lipocalin family proteins in Panstrongylus chinai salivary glands.
| Clade | Similar to | No. of clusters | No. of seq | % seq |
|---|---|---|---|---|
| Clade I | ||||
| pallidipin 2 ( | 16 | 151 | 46.9 | |
| Td42, similar to pallidipin 2 ( | 1 | 1 | 0.3 | |
| Clade II | ||||
| Td38, similar to pallidipin-like salivary lipocalin ( | 2 | 5 | 1.6 | |
| Td33, similar to pallidipin-like salivary lipocalin ( | 1 | 1 | 0.3 | |
| Clade III | ||||
| Td26, similar to salivary lipocalin ( | 2 | 11 | 3.4 | |
| salivary lipocalin ( | 1 | 8 | 2.4 | |
| Td40, similar to triabin-like lipocalin 4a precursor ( | 1 | 3 | 0.9 | |
| triabin-like lipocalin 4a precursor ( | 1 | 2 | 0.7 | |
| salivary lipocalin ( | 1 | 1 | 0.3 | |
| Clade IV | ||||
| Td18, similar to triatin-like salivary lipocalin ( | 4 | 66 | 20.5 | |
| Td11, similar to triatin-like salivary lipocalin ( | 1 | 43 | 13.3 | |
| Td45, similar to pallidipin-like salivary lipocalin ( | 1 | 8 | 2.5 | |
| Clade V | ||||
| lipocalin-like TiLipo37 ( | 2 | 10 | 3.1 | |
| salivary lipocalin ( | 1 | 6 | 1.9 | |
| Others | ||||
| Td24, similar to salivary lipocalin ( | 2 | 2 | 0.7 | |
| triabin-like salivary lipocalin ( | 1 | 1 | 0.3 | |
| salivary lipocalin ( | 1 | 1 | 0.3 | |
| salivary lipocalin 1 ( | 1 | 1 | 0.3 | |
| Td23, similar to salivary lipocalin ( | 1 | 1 | 0.3 | |
| Total | 41 | 322 | 100.0 | |
Fig. 1(A) Sequence alignment of pallidipin 2-like proteins from Panstrongylus chinai (Pc02, Pc07, Pc08, Pc10-Pc12, Pc14, Pc16 and Pc18-Pc22) together with pallidipin 2 from Triatoma pallidipennis (accession number: AAA30329). Black-shaded amino acids represent identical amino acids and gray-shaded amino acids represent conserved amino acids. Dashes indicate gaps introduced for maximal alignment. Asterisks at the top of the amino acids denote conserved cysteine residues. (B) Phylogenetic tree analysis of pallidipin 2-like proteins (Pc02, Pc07, Pc08, Pc10-Pc12, Pc14, Pc16 and Pc18-Pc22) from P. chinai with pallidipin 2 from T. pallidipennis. The numbers in parentheses indicate the number of transcripts of each contig. The scale bar represents 0.1% divergence. Bootstrap values are shown above branches.
Fig. 2Sequence alignment of Td38-like proteins from Panstrongylus chinai (Pc85 and Pc156) together with Td38 from Triatoma dimidiata (accession number: AB470389). Black-shaded amino acids represent identical amino acids and gray-shaded amino acids represent conserved amino acids. Dashes indicate gaps introduced for maximal alignment. Asterisks at the top of the amino acids denote conserved cysteine residues.
Fig. 3(A) Sequence alignment of triafestin-1-like proteins from Panstrongylus chinai (Pc57, Pc64, Pc70, Pc103 and Pc150) together with triafestin-1 from Triatoma infestans (accession number: BAF75464). Black-shaded amino acids represent identical amino acids and gray-shaded amino acids represent conserved amino acids. Dashes indicate gaps introduced for maximal alignment. Asterisks at the top of the amino acids denote conserved cysteine residues, and the GXW motif is indicated by ###. (B) Phylogenetic tree analysis of triafestin-1-like proteins from P. chinai (Pc57, Pc64, Pc70, Pc103 and Pc150) with triafestin-1 from T. infestans. The numbers in parentheses indicate the number of transcripts of each contig. The scale bar represents 0.1% divergence. Bootstrap values are shown above branches.
Fig. 4(A) Sequence alignment of Td18-like proteins from Panstrongylus chinai (Pc13, Pc15, Pc58 and Pc59) together with Td18 from Triatoma dimidiata (accession number: BAI50824). Black-shaded amino acids represent identical amino acids and gray-shaded amino acids represent conserved amino acids. Dashes indicate gaps introduced for maximal alignment. Asterisks at the top of the amino acids denote conserved cysteine residues, and the GXW motif is indicated by ###. (B) Phylogenetic tree analysis of Td18-like proteins from P. chinai (Pc13, Pc15, Pc58 and Pc59) together with Td18 from T. dimidiata. The numbers in parentheses indicate the number of transcripts of each contig. The scale bar represents 0.05% divergence. Bootstrap values are shown above branches.
Fig. 5(A) Sequence alignment of lipocalin-like TiLipo37-like proteins from Panstrongylus chinai (Pc41-Pc43) together with lipocalin-like TiLipo37 from Triatoma infestans (accession number: AAQ68063). Black-shaded amino acids represent identical amino acids and gray-shaded amino acids represent conserved amino acids. Dashes indicate gaps introduced for maximal alignment. Asterisks at the top of the amino acids denote conserved cysteine residues, and the GXW motif is indicated by ###. (B) Phylogenetic tree analysis of lipocalin-like TiLipo37-like proteins from P. chinai (Pc41-Pc43) together with lipocalin-like TiLipo37 from T. infestans. The numbers in parentheses indicate the number of transcripts of each contig. The scale bar represents 0.05% divergence. Bootstrap values are shown above branches.
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