Literature DB >> 29032423

The pathogenesis shared between abdominal aortic aneurysms and intracranial aneurysms: a microarray analysis.

Wen Wang1,2,3,4, Hao Li1,3,4, Zheng Zhao5, Haoyuan Wang6, Dong Zhang1,3,4, Yan Zhang1,3,4, Qing Lan2, Jiangfei Wang1,3,4, Yong Cao7,8,9, Jizong Zhao10,11,12,13.   

Abstract

Abdominal aortic aneurysms (AAAs) and intracranial saccular aneurysms (IAs) are the most common types of aneurysms. This study was to investigate the common pathogenesis shared between these two kinds of aneurysms. We collected 12 IAs samples and 12 control arteries from the Beijing Tiantan Hospital and performed microarray analysis. In addition, we utilized the microarray datasets of IAs and AAAs from the Gene Expression Omnibus (GEO), in combination with our microarray results, to generate messenger RNA expression profiles for both AAAs and IAs in our study. Functional exploration and protein-protein interaction (PPI) analysis were performed. A total of 727 common genes were differentially expressed (404 was upregulated; 323 was downregulated) for both AAAs and IAs. The GO and pathway analyses showed that the common dysregulated genes were mainly enriched in vascular smooth muscle contraction, muscle contraction, immune response, defense response, cell activation, IL-6 signaling and chemokine signaling pathways, etc. The further protein-protein analysis identified 35 hub nodes, including TNF, IL6, MAPK13, and CCL5. These hub node genes were enriched in inflammatory response, positive regulation of IL-6 production, chemokine signaling pathway, and T/B cell receptor signaling pathway. Our study will gain new insight into the molecular mechanisms for the pathogenesis of both types of aneurysms and provide new therapeutic targets for the patients harboring AAAs and IAs.

Entities:  

Keywords:  Abdominal aortic aneurysms; Gene ontology; Intracranial aneurysms; Microarray; Pathway analysis

Mesh:

Substances:

Year:  2017        PMID: 29032423     DOI: 10.1007/s10143-017-0912-2

Source DB:  PubMed          Journal:  Neurosurg Rev        ISSN: 0344-5607            Impact factor:   3.042


  34 in total

Review 1.  Understanding the pathogenesis of abdominal aortic aneurysms.

Authors:  Helena Kuivaniemi; Evan J Ryer; James R Elmore; Gerard Tromp
Journal:  Expert Rev Cardiovasc Ther       Date:  2015

2.  Inflammatory markers associated with abdominal aortic aneurysm.

Authors:  Sarah Lindberg; Moncef Zarrouk; Jan Holst; Anders Gottsäter
Journal:  Eur Cytokine Netw       Date:  2016-09-01       Impact factor: 2.737

3.  Integration of expression profiles and genetic mapping data to identify candidate genes in intracranial aneurysm.

Authors:  Shantel Weinsheimer; Guy M Lenk; Monique van der Voet; Susan Land; Antti Ronkainen; Irina Alafuzoff; Helena Kuivaniemi; Gerard Tromp
Journal:  Physiol Genomics       Date:  2007-09-18       Impact factor: 3.107

4.  Gene expression profiling reveals distinct molecular signatures associated with the rupture of intracranial aneurysm.

Authors:  Hirofumi Nakaoka; Atsushi Tajima; Taku Yoneyama; Kazuyoshi Hosomichi; Hidetoshi Kasuya; Tohru Mizutani; Ituro Inoue
Journal:  Stroke       Date:  2014-06-17       Impact factor: 7.914

5.  Bioconductor: open software development for computational biology and bioinformatics.

Authors:  Robert C Gentleman; Vincent J Carey; Douglas M Bates; Ben Bolstad; Marcel Dettling; Sandrine Dudoit; Byron Ellis; Laurent Gautier; Yongchao Ge; Jeff Gentry; Kurt Hornik; Torsten Hothorn; Wolfgang Huber; Stefano Iacus; Rafael Irizarry; Friedrich Leisch; Cheng Li; Martin Maechler; Anthony J Rossini; Gunther Sawitzki; Colin Smith; Gordon Smyth; Luke Tierney; Jean Y H Yang; Jianhua Zhang
Journal:  Genome Biol       Date:  2004-09-15       Impact factor: 13.583

Review 6.  Monocytes, Macrophages and Other Inflammatory Mediators of Abdominal Aortic Aneurysm.

Authors:  Stephane Potteaux; Alain Tedgui
Journal:  Curr Pharm Des       Date:  2015       Impact factor: 3.116

7.  Prevalence of Intracranial Aneurysms in Patients with Aortic Aneurysms.

Authors:  A Rouchaud; M D Brandt; A M Rydberg; R Kadirvel; K Flemming; D F Kallmes; W Brinjikji
Journal:  AJNR Am J Neuroradiol       Date:  2016-06-02       Impact factor: 3.825

Review 8.  Intracranial and abdominal aortic aneurysms: similarities, differences, and need for a new class of computational models.

Authors:  J D Humphrey; C A Taylor
Journal:  Annu Rev Biomed Eng       Date:  2008       Impact factor: 9.590

9.  Interleukin-6 as a Prognostic Biomarker in Ruptured Intracranial Aneurysms.

Authors:  Hung-Wen Kao; Kwo-Whei Lee; Chen-Ling Kuo; Ching-Shan Huang; Wan-Min Tseng; Chin-San Liu; Ching-Po Lin
Journal:  PLoS One       Date:  2015-07-15       Impact factor: 3.240

10.  Hypermethylation of MAPK13 Promoter in Oesophageal Squamous Cell Carcinoma Is Associated with Loss of p38δ MAPK Expression.

Authors:  Carol O' Callaghan; Liam J Fanning; Orla P Barry
Journal:  Cancers (Basel)       Date:  2015-10-23       Impact factor: 6.639

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