Literature DB >> 29031638

dbGAPs: A comprehensive database of genes and genetic markers associated with psoriasis and its subtypes.

Shweta Aggarwal1, Arnab Nayek1, Dibyabhaba Pradhan1, Rashi Verma1, Monika Yadav1, Kalaiarasan Ponnusamy2, Arun Kumar Jain3.   

Abstract

Psoriasis is a systemic hyperproliferative inflammatory skin disorder, although rarely fatal but significantly reduces quality of life. Understanding the full genetic component of the disease association may provide insight into biological pathways as well as targets and biomarkers for diagnosis, prognosis and therapy. Studies related to psoriasis associated genes and genetic markers are scattered and not easily amendable to data-mining. To alleviate difficulties, we have developed dbGAPs an integrated knowledgebase representing a gateway to psoriasis associated genomic data. The database contains annotation for 202 manually curated genes associated with psoriasis and its subtypes with cross-references. Functional enrichment of these genes, in context of Gene Ontology and pathways, provide insight into their important role in psoriasis etiology and pathogenesis. The dbGAPs interface is enriched with an interactive search engine for data retrieval along with unique customized tools for Single Nucleotide Polymorphism (SNP)/indel detection and SNP/indel annotations. dbGAPs is accessible at http://www.bmicnip.in/dbgaps/.
Copyright © 2017 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Gene annotations; Gene ontology; Psoriasis; Psoriasis associated genes; SNP detection tool; Single nucleotide polymorphism

Year:  2017        PMID: 29031638     DOI: 10.1016/j.ygeno.2017.10.003

Source DB:  PubMed          Journal:  Genomics        ISSN: 0888-7543            Impact factor:   5.736


  3 in total

1.  Psoriasis and cardiovascular disorders: association or epiphenomenon? Meta-analysis of observational studies.

Authors:  Saumya Choudhary; Rachana Patel; Dibyabhaba Pradhan; Ravi Deval; Harpreet Singh; George Thomas; Arun Kumar Jain
Journal:  3 Biotech       Date:  2020-02-07       Impact factor: 2.406

2.  Integrated analysis and identification of nine-gene signature associated to oral squamous cell carcinoma pathogenesis.

Authors:  Monika Yadav; Dibyabhaba Pradhan; Rana P Singh
Journal:  3 Biotech       Date:  2021-04-14       Impact factor: 2.406

Review 3.  Psoriasis and Genetics.

Authors:  Nick Dand; Satveer K Mahil; Francesca Capon; Catherine H Smith; Michael A Simpson; Jonathan N Barker
Journal:  Acta Derm Venereol       Date:  2020-01-30       Impact factor: 3.875

  3 in total

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