Literature DB >> 29030429

Activating mutations in quorum-sensing regulator Rgg2 and its conformational flexibility in the absence of an intermolecular disulfide bond.

Reid V Wilkening1, Glenn C Capodagli2, Atul Khataokar2, Kaitlyn M Tylor1, Matthew B Neiditch3, Michael J Federle4,5.   

Abstract

Rap/Rgg/NprR/PlcR/PrgX (RRNPP) quorum-sensing systems use extracellular peptide pheromones that are detected by cytoplasmic receptors to regulate gene expression in firmicute bacteria. Rgg-type receptors are allosterically regulated through direct pheromone binding to control transcriptional activity; however, the receptor activation mechanism remains poorly understood. Previous work has identified a disulfide bond between Cys-45 residues within the homodimer interface of Rgg2 from Streptococcus dysgalactiae (Rgg2Sd). Here, we compared two Rgg2Sd(C45S) X-ray crystal structures with that of wild-type Rgg2Sd and found that in the absence of the intermolecular disulfide, the Rgg2Sd dimer interface is destabilized and Rgg2Sd can adopt multiple conformations. One conformation closely resembled the "disulfide-locked" Rgg2Sd secondary and tertiary structures, but another displayed more extensive rigid-body shifts as well as dramatic secondary structure changes. In parallel experiments, a genetic screen was used to identify mutations in rgg2 of Streptococcus pyogenes (rgg2Sp ) that conferred pheromone-independent transcriptional activation of an Rgg2-stimulated promoter. Eight mutations yielding constitutive Rgg2 activity, designated Rgg2Sp*, were identified, and five of them clustered in or near an Rgg2 region that underwent conformational changes in one of the Rgg2Sd(C45S) crystal structures. The Rgg2Sp* mutations increased Rgg2Sp sensitivity to pheromone and pheromone variants while displaying decreased sensitivity to the Rgg2 antagonist cyclosporine A. We propose that Rgg2Sp* mutations invoke shifts in free-energy bias to favor the active state of the protein. Finally, we present evidence for an electrostatic interaction between an N-terminal Asp of the pheromone and Arg-153 within the proposed pheromone-binding pocket of Rgg2Sp.
© 2017 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  Streptococcus pyogenes (S. pyogenes); X-ray crystallography; bacterial transcription; disulfide; pheromone

Mesh:

Substances:

Year:  2017        PMID: 29030429      PMCID: PMC5733591          DOI: 10.1074/jbc.M117.801670

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  38 in total

1.  Structure of peptide sex pheromone receptor PrgX and PrgX/pheromone complexes and regulation of conjugation in Enterococcus faecalis.

Authors:  Ke Shi; C Kent Brown; Zu-Yi Gu; Briana K Kozlowicz; Gary M Dunny; Douglas H Ohlendorf; Cathleen A Earhart
Journal:  Proc Natl Acad Sci U S A       Date:  2005-12-08       Impact factor: 11.205

2.  Multiple length peptide-pheromone variants produced by Streptococcus pyogenes directly bind Rgg proteins to confer transcriptional regulation.

Authors:  Chaitanya Aggarwal; Juan Cristobal Jimenez; Dhaval Nanavati; Michael J Federle
Journal:  J Biol Chem       Date:  2014-06-23       Impact factor: 5.157

3.  Rgg protein structure-function and inhibition by cyclic peptide compounds.

Authors:  Vijay Parashar; Chaitanya Aggarwal; Michael J Federle; Matthew B Neiditch
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-06       Impact factor: 11.205

4.  Non-social adaptation defers a tragedy of the commons in Pseudomonas aeruginosa quorum sensing.

Authors:  Kyle L Asfahl; Jessica Walsh; Kerrigan Gilbert; Martin Schuster
Journal:  ISME J       Date:  2015-01-23       Impact factor: 10.302

5.  Induction of a quorum sensing pathway by environmental signals enhances group A streptococcal resistance to lysozyme.

Authors:  Jennifer C Chang; Juan Cristobal Jimenez; Michael J Federle
Journal:  Mol Microbiol       Date:  2015-07-17       Impact factor: 3.501

Review 6.  Peptide pheromone signaling in Streptococcus and Enterococcus.

Authors:  Laura C Cook; Michael J Federle
Journal:  FEMS Microbiol Rev       Date:  2013-10-31       Impact factor: 16.408

7.  Structural basis of response regulator dephosphorylation by Rap phosphatases.

Authors:  Vijay Parashar; Nicolas Mirouze; David A Dubnau; Matthew B Neiditch
Journal:  PLoS Biol       Date:  2011-02-08       Impact factor: 8.029

8.  Two group A streptococcal peptide pheromones act through opposing Rgg regulators to control biofilm development.

Authors:  Jennifer C Chang; Breah LaSarre; Juan C Jimenez; Chaitanya Aggarwal; Michael J Federle
Journal:  PLoS Pathog       Date:  2011-08-04       Impact factor: 6.823

9.  Antagonistic Rgg regulators mediate quorum sensing via competitive DNA binding in Streptococcus pyogenes.

Authors:  Breah Lasarre; Chaitanya Aggarwal; Michael J Federle
Journal:  mBio       Date:  2013-01-02       Impact factor: 7.867

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

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  2 in total

1.  Structure-function studies of Rgg binding to pheromones and target promoters reveal a model of transcription factor interplay.

Authors:  Glenn C Capodagli; Kaitlyn M Tylor; Jason T Kaelber; Vasileios I Petrou; Michael J Federle; Matthew B Neiditch
Journal:  Proc Natl Acad Sci U S A       Date:  2020-09-09       Impact factor: 11.205

2.  In silico characterisation of stand-alone response regulators of Streptococcus pyogenes.

Authors:  Sean J Buckley; Mark R Davies; David J McMillan
Journal:  PLoS One       Date:  2020-10-19       Impact factor: 3.240

  2 in total

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