Literature DB >> 29028934

DeepLoc: prediction of protein subcellular localization using deep learning.

Jose Juan Almagro Armenteros, Casper Kaae Sønderby, Søren Kaae Sønderby, Henrik Nielsen, Ole Winther.   

Abstract

Year:  2017        PMID： 29028934     DOI： 10.1093/bioinformatics/btx548

Source DB:  PubMed          Journal:  Bioinformatics        ISSN： 1367-4803            Impact factor:   6.937


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  11 in total

1.  Blistering1 Modulates Penicillium expansum Virulence Via Vesicle-mediated Protein Secretion.

Authors:  Wayne M Jurick; Hui Peng; Hunter S Beard; Wesley M Garrett; Franz J Lichtner; Dianiris Luciano-Rosario; Otilia Macarisin; Yingjian Liu; Kari A Peter; Verneta L Gaskins; Tianbao Yang; Joseph Mowery; Gary Bauchan; Nancy P Keller; Bret Cooper
Journal:  Mol Cell Proteomics       Date:  2019-12-23       Impact factor: 5.911

2.  Identification of Sub-Golgi protein localization by use of deep representation learning features.

Authors:  Zhibin Lv; Pingping Wang; Quan Zou; Qinghua Jiang
Journal:  Bioinformatics       Date:  2020-12-26       Impact factor: 6.937

3.  Aminoacyl tRNA synthetases as potential drug targets of the Panthera pathogen Babesia.

Authors:  Jyoti Chhibber-Goel; Sarthak Joshi; Amit Sharma
Journal:  Parasit Vectors       Date:  2019-10-14       Impact factor: 3.876

4.  Modeling aspects of the language of life through transfer-learning protein sequences.

Authors:  Michael Heinzinger; Ahmed Elnaggar; Yu Wang; Christian Dallago; Dmitrii Nechaev; Florian Matthes; Burkhard Rost
Journal:  BMC Bioinformatics       Date:  2019-12-17       Impact factor: 3.169

5.  An Oil Hyper-Accumulator Mutant Highlights Peroxisomal ATP Import as a Regulatory Step for Fatty Acid Metabolism in Aurantiochytrium limacinum.

Authors:  Etienne Deragon; Martin Schuler; Riccardo Aiese Cigliano; Younès Dellero; Gregory Si Larbi; Denis Falconet; Juliette Jouhet; Eric Maréchal; Morgane Michaud; Alberto Amato; Fabrice Rébeillé
Journal:  Cells       Date:  2021-10-06       Impact factor: 6.600

Review 6.  New Insights into the Chloroplast Outer Membrane Proteome and Associated Targeting Pathways.

Authors:  Michael Fish; Delaney Nash; Alexandru German; Alyssa Overton; Masoud Jelokhani-Niaraki; Simon D X Chuong; Matthew D Smith
Journal:  Int J Mol Sci       Date:  2022-01-29       Impact factor: 5.923

7.  Comprehensive Analysis of Cytochrome P450 Monooxygenases Reveals Insight Into Their Role in Partial Resistance Against Phytophthora sojae in Soybean.

Authors:  Praveen Khatri; Owen Wally; Istvan Rajcan; Sangeeta Dhaubhadel
Journal:  Front Plant Sci       Date:  2022-04-14       Impact factor: 6.627

8.  CapsNet-SSP: multilane capsule network for predicting human saliva-secretory proteins.

Authors:  Wei Du; Yu Sun; Gaoyang Li; Huansheng Cao; Ran Pang; Ying Li
Journal:  BMC Bioinformatics       Date:  2020-06-09       Impact factor: 3.169

9.  Oncogenes overexpressed in metastatic oral cancers from patients with pain: potential pain mediators released in exosomes.

Authors:  Aditi Bhattacharya; Malvin N Janal; Ratna Veeramachaneni; Igor Dolgalev; Zinaida Dubeykovskaya; Nguyen Huu Tu; Hyesung Kim; Susanna Zhang; Angie K Wu; Mari Hagiwara; A Ross Kerr; Mark D DeLacure; Brian L Schmidt; Donna G Albertson
Journal:  Sci Rep       Date:  2020-09-07       Impact factor: 4.379

10.  Subcellular Localization of Seed-Expressed LEA_4 Proteins Reveals Liquid-Liquid Phase Separation for LEA9 and for LEA48 Homo- and LEA42-LEA48 Heterodimers.

Authors:  Orarat Ginsawaeng; Carolin Heise; Rohit Sangwan; Daniel Karcher; Itzell Euridice Hernández-Sánchez; Arun Sampathkumar; Ellen Zuther
Journal:  Biomolecules       Date:  2021-11-25
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