Literature DB >> 29025585

Genetic Gastric Cancer Susceptibility in the International Clinical Cancer Genomics Community Research Network.

Thomas Slavin1, Susan L Neuhausen2, Christina Rybak3, Ilana Solomon3, Bita Nehoray3, Kathleen Blazer3, Mariana Niell-Swiller3, Aaron W Adamson2, Yate-Ching Yuan4, Kai Yang3, Sharon Sand3, Danielle Castillo3, Josef Herzog3, Xiwei Wu4, Shu Tao4, Tanya Chavez3, Yanghee Woo5, Joseph Chao6, Pamela Mora7, Darling Horcasitas8, Jeffrey Weitzel9.   

Abstract

Few susceptibility genes for gastric cancer have been identified. We sought to identify germline susceptibility genes from participants with gastric cancer from an international hereditary cancer research network. Adults with gastric cancer of any histology, and with a germline DNA sample (n = 51), were retrospectively selected. For those without previously identified germline mutations (n = 43), sequencing was performed for 706 candidate genes. Twenty pathogenic or likely pathogenic variants were identified among 18 participants. Eight of the 18 participants had previous positive clinical testing, including six with CDH1 pathogenic or likely pathogenic variants, and two with pathogenic MSH2 and TP53 variants. Of the remaining 10, six were in BRCA1 DNA damage response pathway genes (ATM, ATR, BRCA2, BRIP1, FANCC, TP53), other variants were identified in CTNNA1, FLCN, SBDS, and GNAS. Participants identified with pathogenic or likely pathogenic variants were younger at gastric cancer diagnosis than those without, 39.1 versus 48.0 years, and over 50% had a close family member with gastric cancer (p-values < 0.0001). In conclusion, many participants were identified with mutations in clinically-actionable genes. Age of onset and family history of gastric cancer were mutation status predictors. Our findings support multigene panels in identifying gastric cancer predisposition.
Copyright © 2017 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Stomach Neoplasms; family; gastric cancer; genetics

Mesh:

Year:  2017        PMID: 29025585      PMCID: PMC5659836          DOI: 10.1016/j.cancergen.2017.08.001

Source DB:  PubMed          Journal:  Cancer Genet


  21 in total

1.  Hereditary Diffuse Gastric Cancer Syndrome: CDH1 Mutations and Beyond.

Authors:  Samantha Hansford; Pardeep Kaurah; Hector Li-Chang; Michelle Woo; Janine Senz; Hugo Pinheiro; Kasmintan A Schrader; David F Schaeffer; Karey Shumansky; George Zogopoulos; Teresa Almeida Santos; Isabel Claro; Joana Carvalho; Cydney Nielsen; Sarah Padilla; Amy Lum; Aline Talhouk; Katie Baker-Lange; Sue Richardson; Ivy Lewis; Noralane M Lindor; Erin Pennell; Andree MacMillan; Bridget Fernandez; Gisella Keller; Henry Lynch; Sohrab P Shah; Parry Guilford; Steven Gallinger; Giovanni Corso; Franco Roviello; Carlos Caldas; Carla Oliveira; Paul D P Pharoah; David G Huntsman
Journal:  JAMA Oncol       Date:  2015-04       Impact factor: 31.777

2.  The spectrum of genetic variants in hereditary pancreatic cancer includes Fanconi anemia genes.

Authors:  Thomas P Slavin; Susan L Neuhausen; Bita Nehoray; Mariana Niell-Swiller; Ilana Solomon; Christina Rybak; Kathleen Blazer; Aaron Adamson; Kai Yang; Sharon Sand; Nancy Guerrero-Llamas; Danielle Castillo; Josef Herzog; Xiwei Wu; Shu Tao; Shivali Raja; Vincent Chung; Gagandeep Singh; Sue Nadesan; Sandra Brown; Marcia Cruz-Correa; Gloria M Petersen; Jeffrey Weitzel
Journal:  Fam Cancer       Date:  2018-04       Impact factor: 2.375

3.  Germline BHD-mutation spectrum and phenotype analysis of a large cohort of families with Birt-Hogg-Dubé syndrome.

Authors:  Laura S Schmidt; Michael L Nickerson; Michelle B Warren; Gladys M Glenn; Jorge R Toro; Maria J Merino; Maria L Turner; Peter L Choyke; Nirmala Sharma; James Peterson; Patrick Morrison; Eamonn R Maher; McClellan M Walther; Berton Zbar; W Marston Linehan
Journal:  Am J Hum Genet       Date:  2005-04-25       Impact factor: 11.025

4.  Extending comprehensive cancer center expertise in clinical cancer genetics and genomics to diverse communities: the power of partnership.

Authors:  Deborah J MacDonald; Kathleen R Blazer; Jeffrey N Weitzel
Journal:  J Natl Compr Canc Netw       Date:  2010-05       Impact factor: 11.908

5.  Germline Mutations in PALB2, BRCA1, and RAD51C, Which Regulate DNA Recombination Repair, in Patients With Gastric Cancer.

Authors:  Ruta Sahasrabudhe; Paul Lott; Mabel Bohorquez; Ted Toal; Ana P Estrada; John J Suarez; Alejandro Brea-Fernández; José Cameselle-Teijeiro; Carla Pinto; Irma Ramos; Alejandra Mantilla; Rodrigo Prieto; Alejandro Corvalan; Enrique Norero; Carolina Alvarez; Teresa Tapia; Pilar Carvallo; Luz M Gonzalez; Alicia Cock-Rada; Angela Solano; Florencia Neffa; Adriana Della Valle; Chris Yau; Gabriela Soares; Alexander Borowsky; Nan Hu; Li-Ji He; Xiao-You Han; Philip R Taylor; Alisa M Goldstein; Javier Torres; Magdalena Echeverry; Clara Ruiz-Ponte; Manuel R Teixeira; Luis G Carvajal-Carmona
Journal:  Gastroenterology       Date:  2016-12-23       Impact factor: 22.682

6.  The Sequence Alignment/Map format and SAMtools.

Authors:  Heng Li; Bob Handsaker; Alec Wysoker; Tim Fennell; Jue Ruan; Nils Homer; Gabor Marth; Goncalo Abecasis; Richard Durbin
Journal:  Bioinformatics       Date:  2009-06-08       Impact factor: 6.937

7.  Predicting functional effect of human missense mutations using PolyPhen-2.

Authors:  Ivan Adzhubei; Daniel M Jordan; Shamil R Sunyaev
Journal:  Curr Protoc Hum Genet       Date:  2013-01

8.  Clinical Application of Multigene Panels: Challenges of Next-Generation Counseling and Cancer Risk Management.

Authors:  Thomas Paul Slavin; Mariana Niell-Swiller; Ilana Solomon; Bita Nehoray; Christina Rybak; Kathleen R Blazer; Jeffrey N Weitzel
Journal:  Front Oncol       Date:  2015-09-29       Impact factor: 6.244

Review 9.  BHD mutations, clinical and molecular genetic investigations of Birt-Hogg-Dubé syndrome: a new series of 50 families and a review of published reports.

Authors:  J R Toro; M-H Wei; G M Glenn; M Weinreich; O Toure; C Vocke; M Turner; P Choyke; M J Merino; P A Pinto; S M Steinberg; L S Schmidt; W M Linehan
Journal:  J Med Genet       Date:  2008-01-30       Impact factor: 6.318

10.  ClinVar: public archive of relationships among sequence variation and human phenotype.

Authors:  Melissa J Landrum; Jennifer M Lee; George R Riley; Wonhee Jang; Wendy S Rubinstein; Deanna M Church; Donna R Maglott
Journal:  Nucleic Acids Res       Date:  2013-11-14       Impact factor: 16.971

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  18 in total

Review 1.  Resolving gastric cancer aetiology: an update in genetic predisposition.

Authors:  Paul C Lott; Luis G Carvajal-Carmona
Journal:  Lancet Gastroenterol Hepatol       Date:  2018-12

Review 2.  Hereditary gastric cancer: what's new? Update 2013-2018.

Authors:  Rachel S van der Post; Carla Oliveira; Parry Guilford; Fátima Carneiro
Journal:  Fam Cancer       Date:  2019-07       Impact factor: 2.375

3.  Germline mutations and age at onset of lung adenocarcinoma.

Authors:  Karen L Reckamp; Carolyn E Behrendt; Thomas P Slavin; Stacy W Gray; Danielle K Castillo; Marianna Koczywas; Mihaela C Cristea; Kirsten M Babski; Donna Stearns; Catherine A Marcum; Yenni P Rodriguez; Amie J Hass; Mary M Vecchio; Pamela Mora; Aleck E Cervantes; Sharon R Sand; Rosa M Mejia; Terrence C Tsou; Ravi Salgia; Jeffrey N Weitzel
Journal:  Cancer       Date:  2021-04-15       Impact factor: 6.921

4.  Germline pathogenic variants in PALB2 and other cancer-predisposing genes in families with hereditary diffuse gastric cancer without CDH1 mutation: a whole-exome sequencing study.

Authors:  Eleanor Fewings; Alexey Larionov; James Redman; Mae A Goldgraben; James Scarth; Susan Richardson; Carole Brewer; Rosemarie Davidson; Ian Ellis; D Gareth Evans; Dorothy Halliday; Louise Izatt; Peter Marks; Vivienne McConnell; Louis Verbist; Rebecca Mayes; Graeme R Clark; James Hadfield; Suet-Feung Chin; Manuel R Teixeira; Olivier T Giger; Richard Hardwick; Massimiliano di Pietro; Maria O'Donovan; Paul Pharoah; Carlos Caldas; Rebecca C Fitzgerald; Marc Tischkowitz
Journal:  Lancet Gastroenterol Hepatol       Date:  2018-04-27

5.  The effect of Ganoderma lucidum extract on immunological function and identify its anti-tumor immunostimulatory activity based on the biological network.

Authors:  Ruolin Zhao; Qilong Chen; Yu-Min He
Journal:  Sci Rep       Date:  2018-08-23       Impact factor: 4.379

6.  Geospatial analyses identify regional hot spots of diffuse gastric cancer in rural Central America.

Authors:  Ricardo L Dominguez; Charlotte B Cherry; Dago Estevez-Ordonez; Robertino Mera; Veronica Escamilla; Michael Pawlita; Tim Waterboer; Keith T Wilson; Richard M Peek; Gloria Tavera; Scott M Williams; Margaret L Gulley; Michael Emch; Douglas R Morgan
Journal:  BMC Cancer       Date:  2019-06-07       Impact factor: 4.430

Review 7.  Genetics and genomics in Peru: Clinical and research perspective.

Authors:  Heinner Guio; Julio A Poterico; Kelly S Levano; Mario Cornejo-Olivas; Pilar Mazzetti; Gioconda Manassero-Morales; Manuel F Ugarte-Gil; Eduardo Acevedo-Vásquez; Milagros Dueñas-Roque; Alejandro Piscoya; Ricardo Fujita; Cesar Sanchez; Sandro Casavilca-Zambrano; Luis Jaramillo-Valverde; Yasser Sullcahuaman-Allende; Juan M Iglesias-Pedraz; Hugo Abarca-Barriga
Journal:  Mol Genet Genomic Med       Date:  2018-11       Impact factor: 2.183

8.  Insights into BRCA Cancer Predisposition from Integrated Germline and Somatic Analyses in 7632 Cancers.

Authors:  Shawn Yost; Elise Ruark; Ludmil B Alexandrov; Nazneen Rahman
Journal:  JNCI Cancer Spectr       Date:  2019-04-19

9.  Exploring the differences between early-onset gastric cancer and traditional-onset gastric cancer.

Authors:  Anwar Giryes; Hani Oweira; Meinrad Mannhart; Michael Decker; Omar Abdel-Rahman
Journal:  J Gastrointest Oncol       Date:  2018-12

10.  A Novel, Likely Pathogenic MAX Germline Variant in a Patient With Unilateral Pheochromocytoma.

Authors:  César Ernesto Lam-Chung; Larissa López Rodríguez; Jazmín Arteaga Vázquez; Yanin Chávarri-Guerra; Rebeca Arízaga-Ramírez; Orlando Falcon Antonio; Jazmín De Anda González; María Aurelia López-Hernández; Jeffrey N Weitzel; Danielle Castillo; Francisco Javier Gómez-Pérez; Daniel Cuevas-Ramos
Journal:  J Endocr Soc       Date:  2021-06-03
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