Literature DB >> 29025144

Synthea: An approach, method, and software mechanism for generating synthetic patients and the synthetic electronic health care record.

Jason Walonoski1, Mark Kramer1, Joseph Nichols1, Andre Quina1, Chris Moesel1, Dylan Hall1, Carlton Duffett1, Kudakwashe Dube2, Thomas Gallagher3, Scott McLachlan2.   

Abstract

OBJECTIVE: Our objective is to create a source of synthetic electronic health records that is readily available; suited to industrial, innovation, research, and educational uses; and free of legal, privacy, security, and intellectual property restrictions.
MATERIALS AND METHODS: We developed Synthea, an open-source software package that simulates the lifespans of synthetic patients, modeling the 10 most frequent reasons for primary care encounters and the 10 chronic conditions with the highest morbidity in the United States.
RESULTS: Synthea adheres to a previously developed conceptual framework, scales via open-source deployment on the Internet, and may be extended with additional disease and treatment modules developed by its user community. One million synthetic patient records are now freely available online, encoded in standard formats (eg, Health Level-7 [HL7] Fast Healthcare Interoperability Resources [FHIR] and Consolidated-Clinical Document Architecture), and accessible through an HL7 FHIR application program interface. DISCUSSION: Health care lags other industries in information technology, data exchange, and interoperability. The lack of freely distributable health records has long hindered innovation in health care. Approaches and tools are available to inexpensively generate synthetic health records at scale without accidental disclosure risk, lowering current barriers to entry for promising early-stage developments. By engaging a growing community of users, the synthetic data generated will become increasingly comprehensive, detailed, and realistic over time.
CONCLUSION: Synthetic patients can be simulated with models of disease progression and corresponding standards of care to produce risk-free realistic synthetic health care records at scale.
© The Author 2017. Published by Oxford University Press on behalf of the American Medical Informatics Association.

Entities:  

Keywords:  RS-EHR; clinical pathways; computer simulation; electronic health records; patient-specific modeling

Year:  2018        PMID: 29025144     DOI: 10.1093/jamia/ocx079

Source DB:  PubMed          Journal:  J Am Med Inform Assoc        ISSN: 1067-5027            Impact factor:   4.497


  29 in total

1.  Influence of simulation on electronic health record use patterns among pediatric residents.

Authors:  Evan W Orenstein; Irit R Rasooly; Mark V Mai; Adam C Dziorny; Wanczyk Phillips; Levon Utidjian; Anthony Luberti; Jill Posner; Rebecca Tenney-Soeiro; Chris P Bonafide
Journal:  J Am Med Inform Assoc       Date:  2018-11-01       Impact factor: 4.497

2.  High Performance Computing on Flat FHIR Files Created with the New SMART/HL7 Bulk Data Access Standard.

Authors:  Dianbo Liu; Ricky Sahu; Vlad Ignatov; Dan Gottlieb; Kenneth D Mandl
Journal:  AMIA Annu Symp Proc       Date:  2020-03-04

3.  Ensuring electronic medical record simulation through better training, modeling, and evaluation.

Authors:  Ziqi Zhang; Chao Yan; Diego A Mesa; Jimeng Sun; Bradley A Malin
Journal:  J Am Med Inform Assoc       Date:  2020-01-01       Impact factor: 4.497

4.  Using FHIR to Construct a Corpus of Clinical Questions Annotated with Logical Forms and Answers.

Authors:  Sarvesh Soni; Meghana Gudala; Daisy Zhe Wang; Kirk Roberts
Journal:  AMIA Annu Symp Proc       Date:  2020-03-04

5.  Creating synthetic patient data to support the design and evaluation of novel health information technology.

Authors:  Ari H Pollack; Tamara D Simon; Jaime Snyder; Wanda Pratt
Journal:  J Biomed Inform       Date:  2019-05-10       Impact factor: 6.317

6.  BlockIoT: Blockchain-based Health Data Integration using IoT Devices.

Authors:  Manan Shukla; Jianjing Lin; Oshani Seneviratne
Journal:  AMIA Annu Symp Proc       Date:  2022-02-21

7.  A Machine Learning Pipeline for Accurate COVID-19 Health Outcome Prediction using Longitudinal Electronic Health Records.

Authors:  Alice Feng
Journal:  AMIA Annu Symp Proc       Date:  2022-02-21

8.  A Novel Approach to Generate a Virtual Population of Human Coronary Arteries for In Silico Clinical Trials of Stent Design.

Authors:  Dimitrios Pleouras; Antonis Sakellarios; George Rigas; Georgia S Karanasiou; Panagiota Tsompou; Gianna Karanasiou; Vassiliki Kigka; Savvas Kyriakidis; Vasileios Pezoulas; George Gois; Nikolaos Tachos; Aidonis Ramos; Gualtiero Pelosi; Silvia Rocchiccioli; Lampros Michalis; Dimitrios I Fotiadis
Journal:  IEEE Open J Eng Med Biol       Date:  2021-05-20

9.  A simple electronic medical record system designed for research.

Authors:  Andrew J King; Luca Calzoni; Mohammadamin Tajgardoon; Gregory F Cooper; Gilles Clermont; Harry Hochheiser; Shyam Visweswaran
Journal:  JAMIA Open       Date:  2021-07-31

10.  Application of Bayesian networks to generate synthetic health data.

Authors:  Dhamanpreet Kaur; Matthew Sobiesk; Shubham Patil; Jin Liu; Puran Bhagat; Amar Gupta; Natasha Markuzon
Journal:  J Am Med Inform Assoc       Date:  2021-03-18       Impact factor: 4.497

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