Literature DB >> 29023438

The TAD-pathway for GWAS signals.

Natalia Pervjakova1, Inga Prokopenko2.   

Abstract

Mesh:

Year:  2017        PMID: 29023438      PMCID: PMC5643975          DOI: 10.1038/ejhg.2017.148

Source DB:  PubMed          Journal:  Eur J Hum Genet        ISSN: 1018-4813            Impact factor:   4.246


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  12 in total

Review 1.  Gene Positioning Effects on Expression in Eukaryotes.

Authors:  Huy Q Nguyen; Giovanni Bosco
Journal:  Annu Rev Genet       Date:  2015-10-02       Impact factor: 16.830

Review 2.  Structure, function and evolution of topologically associating domains (TADs) at HOX loci.

Authors:  Nicolas Lonfat; Denis Duboule
Journal:  FEBS Lett       Date:  2015-04-23       Impact factor: 4.124

3.  Implicating candidate genes at GWAS signals by leveraging topologically associating domains.

Authors:  Gregory P Way; Daniel W Youngstrom; Kurt D Hankenson; Casey S Greene; Struan Fa Grant
Journal:  Eur J Hum Genet       Date:  2017-08-09       Impact factor: 4.246

Review 4.  Organization and function of the 3D genome.

Authors:  Boyan Bonev; Giacomo Cavalli
Journal:  Nat Rev Genet       Date:  2016-10-14       Impact factor: 53.242

5.  Structural heterogeneity and functional diversity of topologically associating domains in mammalian genomes.

Authors:  Xiao-Tao Wang; Peng-Fei Dong; Hong-Yu Zhang; Cheng Peng
Journal:  Nucleic Acids Res       Date:  2015-07-06       Impact factor: 16.971

Review 6.  Chromatin-driven behavior of topologically associating domains.

Authors:  Filippo Ciabrelli; Giacomo Cavalli
Journal:  J Mol Biol       Date:  2014-10-02       Impact factor: 5.469

Review 7.  The role of genomic imprinting in biology and disease: an expanding view.

Authors:  Jo Peters
Journal:  Nat Rev Genet       Date:  2014-06-24       Impact factor: 53.242

8.  Topological domains in mammalian genomes identified by analysis of chromatin interactions.

Authors:  Jesse R Dixon; Siddarth Selvaraj; Feng Yue; Audrey Kim; Yan Li; Yin Shen; Ming Hu; Jun S Liu; Bing Ren
Journal:  Nature       Date:  2012-04-11       Impact factor: 49.962

9.  Topologically associating domains are stable units of replication-timing regulation.

Authors:  Benjamin D Pope; Tyrone Ryba; Vishnu Dileep; Feng Yue; Weisheng Wu; Olgert Denas; Daniel L Vera; Yanli Wang; R Scott Hansen; Theresa K Canfield; Robert E Thurman; Yong Cheng; Günhan Gülsoy; Jonathan H Dennis; Michael P Snyder; John A Stamatoyannopoulos; James Taylor; Ross C Hardison; Tamer Kahveci; Bing Ren; David M Gilbert
Journal:  Nature       Date:  2014-11-20       Impact factor: 49.962

10.  A critical assessment of topologically associating domain prediction tools.

Authors:  Rola Dali; Mathieu Blanchette
Journal:  Nucleic Acids Res       Date:  2017-04-07       Impact factor: 16.971

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  2 in total

1.  Genome-wide assessment of gene-by-smoking interactions in COPD.

Authors:  Boram Park; So-My Koo; Jaehoon An; MoonGyu Lee; Hae Yeon Kang; Dandi Qiao; Michael H Cho; Joohon Sung; Edwin K Silverman; Hyeon-Jong Yang; Sungho Won
Journal:  Sci Rep       Date:  2018-06-18       Impact factor: 4.379

2.  p63 establishes epithelial enhancers at critical craniofacial development genes.

Authors:  Enrique Lin-Shiao; Yemin Lan; Julia Welzenbach; Katherine A Alexander; Zhen Zhang; Michael Knapp; Elisabeth Mangold; Morgan Sammons; Kerstin U Ludwig; Shelley L Berger
Journal:  Sci Adv       Date:  2019-05-01       Impact factor: 14.136

  2 in total

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