Literature DB >> 29022066

Spirosoma harenae sp. nov., a Bacterium Isolated from a Sandy Beach.

Leonid N Ten1, Nabil Elderiny1, Jae-Jin Lee1, Seung-Yeol Lee1, Sangkyu Park1, Dae Sung Lee2, Myung Kyum Kim3, Hee-Young Jung4,5.   

Abstract

A Gram-stain-negative, non-motile, non-spore-forming, rod-shaped, aerobic bacterium, designated 15J8-9T, was isolated from a sandy beach in Jeju Island, South Korea. The isolate was able to grow between 10 and 30 °C, pH 5-8, and in presence of 0-1% (w/v) NaCl. Based on 16S rRNA gene phylogenetic analysis, the novel strain was closely related to members of the genus Spirosoma (96.1-90.9% similarities) and showed highest sequence similarity to Spirosoma panaciterrae DSM 21099T (96.1%). The G + C content of the genomic DNA of strain 15J8-9T was 45.1 mol%. The isolate contained menaquinone MK-7 as the predominant respiratory quinone, phosphatidylethanolamine as the major polar lipid, and summed feature 3 (C16:1 ω6c/C16:1 ω7c; 28.0%), C16:1 ω5c (23.4%), iso-C15:0 (13.5%), and C16:0 (11.5%) as the major fatty acids that supported the affiliation of strain 15J8-9T to the genus Spirosoma. The isolate could be differentiated clearly from recognized Spirosoma species on the basis of several phenotypic, genotypic and chemotaxonomic features. Therefore, strain 15J8-9T is considered to represent a novel species of the genus the genus Spirosoma, for which the name Spirosoma harenae sp. nov. is proposed. The type strain is 15J8-9T (= KCTC 52030T = JCM 31993T).

Entities:  

Keywords:  Bacteroidetes; Polyphasic taxonomy; Spirosoma

Mesh:

Substances:

Year:  2017        PMID: 29022066     DOI: 10.1007/s00284-017-1363-2

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN: 0343-8651            Impact factor:   2.188


  24 in total

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Journal:  J Bacteriol       Date:  1991-01       Impact factor: 3.490

2.  The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools.

Authors:  J D Thompson; T J Gibson; F Plewniak; F Jeanmougin; D G Higgins
Journal:  Nucleic Acids Res       Date:  1997-12-15       Impact factor: 16.971

3.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

4.  Spirosoma soli sp. nov., isolated from biological soil crusts.

Authors:  Shan Shan Yang; Kai Tang; Xiaojie Zhang; Jianxia Wang; Xiaobing Wang; Fuying Feng; Heng Li
Journal:  Int J Syst Evol Microbiol       Date:  2016-10-09       Impact factor: 2.747

5.  Spirosoma swuense sp. nov., isolated from wet soil.

Authors:  Eun Sun Joo; Eun Bit Kim; Seon Hwa Jeon; Sathiyaraj Srinivasan; Myung Kyum Kim
Journal:  Int J Syst Evol Microbiol       Date:  2017-04-03       Impact factor: 2.747

6.  Spirosoma rigui sp. nov., isolated from fresh water.

Authors:  Keun Sik Baik; Mi Sun Kim; Seong Chan Park; Dong Wan Lee; Soon Dong Lee; Jong-Ok Ka; Sang Ki Choi; Chi Nam Seong
Journal:  Int J Syst Evol Microbiol       Date:  2007-12       Impact factor: 2.747

7.  Spirosoma lacussanchae sp. nov., a phosphate-solubilizing bacterium isolated from a freshwater reservoir.

Authors:  Yong Li; Meng-Jie Ai; Ye Sun; Yu-Qin Zhang; Jian-Qiang Zhang
Journal:  Int J Syst Evol Microbiol       Date:  2017-08-25       Impact factor: 2.747

8.  Spirosoma knui sp. nov., a radiation-resistant bacterium isolated from the Han River.

Authors:  Jae-Jin Lee; Yeon-Hee Lee; Su-Jin Park; Seung-Yeol Lee; Byung-Oh Kim; Leonid N Ten; Myung Kyum Kim; Hee-Young Jung
Journal:  Int J Syst Evol Microbiol       Date:  2017-05-30       Impact factor: 2.747

9.  Spirosoma fluviale sp. nov., isolated from river water.

Authors:  Kouta Hatayama; Teruaki Kuno
Journal:  Int J Syst Evol Microbiol       Date:  2015-07-09       Impact factor: 2.747

10.  Spirosoma aerolatum sp. nov., isolated from a motor car air conditioning system.

Authors:  Dong-Uk Kim; Hyosun Lee; Song-Gun Kim; Jae-Hyung Ahn; So Yoon Park; Jong-Ok Ka
Journal:  Int J Syst Evol Microbiol       Date:  2015-11       Impact factor: 2.747

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