Literature DB >> 29019143

Structure and mechanism of plant histone mark readers.

Rui Liu1, Xueqin Li1,2, Wei Chen1, Jiamu Du3.   

Abstract

In eukaryotes, epigenetic-based mechanisms are involved in almost all the important biological processes. Amongst different epigenetic regulation pathways, the dynamic covalent modifications on histones are the most extensively investigated and characterized types. The covalent modifications on histone can be "read" by specific protein domains and then subsequently trigger downstream signaling events. Plants generally possess epigenetic regulation systems similar to animals and fungi, but also exhibit some plant-specific features. Similar to animals and fungi, plants require distinct protein domains to specifically "read" modified histones in both modification-specific and sequence-specific manners. In this review, we will focus on recent progress of the structural studies on the recognition of the epigenetic marks on histones by plant reader proteins, and further summarize the general and exceptional features of plant histone mark readers.

Keywords:  epigenetics; histone mark; histone modifications; plant; structure

Mesh:

Substances:

Year:  2017        PMID: 29019143     DOI: 10.1007/s11427-017-9163-4

Source DB:  PubMed          Journal:  Sci China Life Sci        ISSN: 1674-7305            Impact factor:   6.038


  6 in total

1.  Dual Recognition of H3K4me3 and DNA by the ISWI Component ARID5 Regulates the Floral Transition in Arabidopsis.

Authors:  Lian-Mei Tan; Rui Liu; Bo-Wen Gu; Cui-Jun Zhang; Jinyan Luo; Jing Guo; Yuhua Wang; Lixian Chen; Xuan Du; Sisi Li; Chang-Rong Shao; Yin-Na Su; Xue-Wei Cai; Rong-Nan Lin; Lin Li; She Chen; Jiamu Du; Xin-Jian He
Journal:  Plant Cell       Date:  2020-04-30       Impact factor: 11.277

2.  Genome-wide investigation of histone acetyltransferase gene family and its responses to biotic and abiotic stress in foxtail millet (Setaria italica [L.] P. Beauv).

Authors:  Guofang Xing; Minshan Jin; Ruifang Qu; Jiewei Zhang; Yuanhuai Han; Yanqing Han; Xingchun Wang; Xukai Li; Fangfang Ma; Xiongwei Zhao
Journal:  BMC Plant Biol       Date:  2022-06-14       Impact factor: 5.260

3.  Coupling of H3K27me3 recognition with transcriptional repression through the BAH-PHD-CPL2 complex in Arabidopsis.

Authors:  Yi-Zhe Zhang; Jianlong Yuan; Lingrui Zhang; Chunxiang Chen; Yuhua Wang; Guiping Zhang; Li Peng; Si-Si Xie; Jing Jiang; Jian-Kang Zhu; Jiamu Du; Cheng-Guo Duan
Journal:  Nat Commun       Date:  2020-12-04       Impact factor: 14.919

4.  Dual recognition of H3K4me3 and H3K27me3 by a plant histone reader SHL.

Authors:  Shuiming Qian; Xinchen Lv; Ray N Scheid; Li Lu; Zhenlin Yang; Wei Chen; Rui Liu; Melissa D Boersma; John M Denu; Xuehua Zhong; Jiamu Du
Journal:  Nat Commun       Date:  2018-06-21       Impact factor: 14.919

5.  Arabidopsis AGDP1 links H3K9me2 to DNA methylation in heterochromatin.

Authors:  Cuijun Zhang; Xuan Du; Kai Tang; Zhenlin Yang; Li Pan; Peipei Zhu; Jinyan Luo; Yuwei Jiang; Hui Zhang; Huafang Wan; Xingang Wang; Fengkai Wu; W Andy Tao; Xin-Jian He; Heng Zhang; Ray A Bressan; Jiamu Du; Jian-Kang Zhu
Journal:  Nat Commun       Date:  2018-10-31       Impact factor: 14.919

6.  A histone H3K4me1-specific binding protein is required for siRNA accumulation and DNA methylation at a subset of loci targeted by RNA-directed DNA methylation.

Authors:  Qingfeng Niu; Zhe Song; Kai Tang; Lixian Chen; Lisi Wang; Ting Ban; Zhongxin Guo; Chanhong Kim; Heng Zhang; Cheng-Guo Duan; Huiming Zhang; Jian-Kang Zhu; Jiamu Du; Zhaobo Lang
Journal:  Nat Commun       Date:  2021-06-07       Impact factor: 14.919

  6 in total

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