Literature DB >> 29019120

Two-Dimensional Gel Electrophoresis and 2D-DIGE.

Paula Meleady1.   

Abstract

Two-dimensional polyacrylamide gel electrophoresis (2D-PAGE) continues to be one of the most versatile and widely used techniques to study the proteome of a biological system. In particular, a modified version of 2D-PAGE, two-dimensional difference gel electrophoresis (2D-DIGE), which uses differential labeling of protein samples with up to three fluorescent tags, offers greater sensitivity and reproducibility over conventional 2D-PAGE gels for differential quantitative analysis of protein expression between experimental groups. Both these methods have distinct advantages in the separation and identification of thousands of individual proteins species including protein isoforms and post-translational modifications. This review will discuss the principles of 2D-PAGE and 2D-DIGE including limitations to the methods. 2D-PAGE and 2D-DIGE continue to be popular methods in bioprocessing-related research (particularly on recombinant Chinese hamster ovary cells), which will also be discussed in the review chapter.

Entities:  

Keywords:  Protein expression profiling; Proteomics; Two-dimensional difference gel electrophoresis; Two-dimensional gel electrophoresis

Mesh:

Substances:

Year:  2018        PMID: 29019120     DOI: 10.1007/978-1-4939-7268-5_1

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  15 in total

1.  Comparing Complex Protein Samples Using Two-Dimensional Polyacrylamide Gels.

Authors:  Sandra Harper; David W Speicher
Journal:  Curr Protoc Protein Sci       Date:  2019-03-06

2.  Diverse Aquatic Animal Matrices Play a Key Role in Survival and Potential Virulence of Non-O1/O139 Vibrio cholerae Isolates.

Authors:  Lili Yan; Yinzhe Jin; Beiyu Zhang; Yingwei Xu; Xu Peng; Si Qin; Lanming Chen
Journal:  Front Microbiol       Date:  2022-06-21       Impact factor: 6.064

3.  Characterization of the molecular changes associated with the overexpression of a novel epithelial cadherin splice variant mRNA in a breast cancer model using proteomics and bioinformatics approaches: identification of changes in cell metabolism and an increased expression of lactate dehydrogenase B.

Authors:  Marina Rosso; Lara Lapyckyj; María José Besso; Marta Monge; Jaume Reventós; Francesc Canals; Jorge Oswaldo Quevedo Cuenca; María Laura Matos; Mónica Hebe Vazquez-Levin
Journal:  Cancer Metab       Date:  2019-05-09

4.  Utilization of dried and long-term stored polyacrylamide gels for the advanced proteomic profiling of mitochondrial contact sites from rat liver.

Authors:  Sandra Murphy; Michael Henry; Paula Meleady; Kay Ohlendieck
Journal:  Biol Methods Protoc       Date:  2018-08-17

Review 5.  Proteome Analysis of Molecular Events in Oral Pathogenesis and Virus: A Review with a Particular Focus on Periodontitis.

Authors:  Sachio Tsuchida
Journal:  Int J Mol Sci       Date:  2020-07-22       Impact factor: 5.923

6.  Characterization of Odontogenic Differentiation from Human Dental Pulp Stem Cells Using TMT-Based Proteomic Analysis.

Authors:  Xijuan Xiao; Caihong Xin; Yuqin Zhang; Jie Yan; Zhao Chen; Huiyong Xu; Min Liang; Buling Wu; Fuchun Fang; Wei Qiu
Journal:  Biomed Res Int       Date:  2020-12-10       Impact factor: 3.411

7.  Dynamic proteomic profiling of human periodontal ligament stem cells during osteogenic differentiation.

Authors:  Jianjia Li; Zhifa Wang; Xiangyu Huang; Zhaodan Wang; Zehao Chen; Runting Wang; Zhao Chen; Wei Liu; Buling Wu; Fuchun Fang; Wei Qiu
Journal:  Stem Cell Res Ther       Date:  2021-02-03       Impact factor: 6.832

8.  Alterations of the Platelet Proteome in Lung Cancer: Accelerated F13A1 and ER Processing as New Actors in Hypercoagulability.

Authors:  Huriye Ercan; Lisa-Marie Mauracher; Ella Grilz; Lena Hell; Roland Hellinger; Johannes A Schmid; Florian Moik; Cihan Ay; Ingrid Pabinger; Maria Zellner
Journal:  Cancers (Basel)       Date:  2021-05-08       Impact factor: 6.639

9.  MYH9 facilitates autoregulation of adipose tissue depot development.

Authors:  Sin Ying Cheung; Mohd Sayeed; Krishnamurthy Nakuluri; Liang Li; Brian J Feldman
Journal:  JCI Insight       Date:  2021-05-10

10.  Identification of protein changes in the blood plasma of lung cancer patients subjected to chemotherapy using a 2D-DIGE approach.

Authors:  Andrzej Ciereszko; Mariola A Dietrich; Mariola Słowińska; Joanna Nynca; Michał Ciborowski; Joanna Kisluk; Anna Michalska-Falkowska; Joanna Reszec; Ewa Sierko; Jacek Nikliński
Journal:  PLoS One       Date:  2019-10-17       Impact factor: 3.240

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