Literature DB >> 28993491

Methods in field chronobiology.

Davide M Dominoni1,2, Susanne Åkesson3, Raymond Klaassen4, Kamiel Spoelstra5, Martin Bulla6,7,8.   

Abstract

Chronobiological research has seen a continuous development of novel approaches and techniques to measure rhythmicity at different levels of biological organization from locomotor activity (e.g. migratory restlessness) to physiology (e.g. temperature and hormone rhythms, and relatively recently also in genes, proteins and metabolites). However, the methodological advancements in this field have been mostly and sometimes exclusively used only in indoor laboratory settings. In parallel, there has been an unprecedented and rapid improvement in our ability to track animals and their behaviour in the wild. However, while the spatial analysis of tracking data is widespread, its temporal aspect is largely unexplored. Here, we review the tools that are available or have potential to record rhythms in the wild animals with emphasis on currently overlooked approaches and monitoring systems. We then demonstrate, in three question-driven case studies, how the integration of traditional and newer approaches can help answer novel chronobiological questions in free-living animals. Finally, we highlight unresolved issues in field chronobiology that may benefit from technological development in the future. As most of the studies in the field are descriptive, the future challenge lies in applying the diverse technologies to experimental set-ups in the wild.This article is part of the themed issue 'Wild clocks: integrating chronobiology and ecology to understand timekeeping in free-living animals'.
© 2017 The Author(s).

Keywords:  GPS-tracking; clocks; fibroblasts; incubation; radar; remote sensing

Mesh:

Year:  2017        PMID: 28993491      PMCID: PMC5647274          DOI: 10.1098/rstb.2016.0247

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  72 in total

1.  Insect monitoring with fluorescence lidar techniques: field experiments.

Authors:  Zuguang Guan; Mikkel Brydegaard; Patrik Lundin; Maren Wellenreuther; Anna Runemark; Erik I Svensson; Sune Svanberg
Journal:  Appl Opt       Date:  2010-09-20       Impact factor: 1.980

2.  Daily body temperature rhythms persist under the midnight sun but are absent during hibernation in free-living arctic ground squirrels.

Authors:  Cory T Williams; Brian M Barnes; C Loren Buck
Journal:  Biol Lett       Date:  2011-07-13       Impact factor: 3.703

3.  Unexpected diversity in socially synchronized rhythms of shorebirds.

Authors:  Martin Bulla; Mihai Valcu; Adriaan M Dokter; Alexei G Dondua; András Kosztolányi; Anne L Rutten; Barbara Helm; Brett K Sandercock; Bruce Casler; Bruno J Ens; Caleb S Spiegel; Chris J Hassell; Clemens Küpper; Clive Minton; Daniel Burgas; David B Lank; David C Payer; Egor Y Loktionov; Erica Nol; Eunbi Kwon; Fletcher Smith; H River Gates; Hana Vitnerová; Hanna Prüter; James A Johnson; James J H St Clair; Jean-François Lamarre; Jennie Rausch; Jeroen Reneerkens; Jesse R Conklin; Joanna Burger; Joe Liebezeit; Joël Bêty; Jonathan T Coleman; Jordi Figuerola; Jos C E W Hooijmeijer; José A Alves; Joseph A M Smith; Karel Weidinger; Kari Koivula; Ken Gosbell; Klaus-Michael Exo; Larry Niles; Laura Koloski; Laura McKinnon; Libor Praus; Marcel Klaassen; Marie-Andrée Giroux; Martin Sládeček; Megan L Boldenow; Michael I Goldstein; Miroslav Šálek; Nathan Senner; Nelli Rönkä; Nicolas Lecomte; Olivier Gilg; Orsolya Vincze; Oscar W Johnson; Paul A Smith; Paul F Woodard; Pavel S Tomkovich; Phil F Battley; Rebecca Bentzen; Richard B Lanctot; Ron Porter; Sarah T Saalfeld; Scott Freeman; Stephen C Brown; Stephen Yezerinac; Tamás Székely; Tomás Montalvo; Theunis Piersma; Vanessa Loverti; Veli-Matti Pakanen; Wim Tijsen; Bart Kempenaers
Journal:  Nature       Date:  2016-11-23       Impact factor: 49.962

4.  Effects of nocturnal illumination on life-history decisions and fitness in two wild songbird species.

Authors:  Maaike de Jong; Jenny Q Ouyang; Arnaud Da Silva; Roy H A van Grunsven; Bart Kempenaers; Marcel E Visser; Kamiel Spoelstra
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2015-05-05       Impact factor: 6.237

Review 5.  Flexible clock systems: adjusting the temporal programme.

Authors:  Daan R van der Veen; Sjaak J Riede; Paul D Heideman; Michaela Hau; Vincent van der Vinne; Roelof A Hut
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-11-19       Impact factor: 6.237

6.  Deviation of innate circadian period from 24 h reduces longevity in mice.

Authors:  Sergiy Libert; Michael S Bonkowski; Kelli Pointer; Scott D Pletcher; Leonard Guarente
Journal:  Aging Cell       Date:  2012-07-12       Impact factor: 9.304

7.  Circadian systems: longevity as a function of circadian resonance in Drosophila melanogaster.

Authors:  C S Pittendrigh; D H Minis
Journal:  Proc Natl Acad Sci U S A       Date:  1972-06       Impact factor: 11.205

8.  Clocks for the city: circadian differences between forest and city songbirds.

Authors:  D M Dominoni; B Helm; M Lehmann; H B Dowse; J Partecke
Journal:  Proc Biol Sci       Date:  2013-06-05       Impact factor: 5.349

9.  Natural selection against a circadian clock gene mutation in mice.

Authors:  Kamiel Spoelstra; Martin Wikelski; Serge Daan; Andrew S I Loudon; Michaela Hau
Journal:  Proc Natl Acad Sci U S A       Date:  2015-12-29       Impact factor: 11.205

10.  Biparental incubation patterns in a high-Arctic breeding shorebird: how do pairs divide their duties?

Authors:  Martin Bulla; Mihai Valcu; Anne L Rutten; Bart Kempenaers
Journal:  Behav Ecol       Date:  2013-10-29       Impact factor: 2.671

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  14 in total

1.  Wild clocks: preface and glossary.

Authors:  William J Schwartz; Barbara Helm; Menno P Gerkema
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-11-19       Impact factor: 6.237

Review 2.  Timing as a sexually selected trait: the right mate at the right moment.

Authors:  Michaela Hau; Davide Dominoni; Stefania Casagrande; C Loren Buck; Gabriela Wagner; David Hazlerigg; Timothy Greives; Roelof A Hut
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-11-19       Impact factor: 6.237

Review 3.  Timing avian long-distance migration: from internal clock mechanisms to global flights.

Authors:  Susanne Åkesson; Mihaela Ilieva; Julia Karagicheva; Eldar Rakhimberdiev; Barbara Tomotani; Barbara Helm
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-11-19       Impact factor: 6.237

Review 4.  Two sides of a coin: ecological and chronobiological perspectives of timing in the wild.

Authors:  Barbara Helm; Marcel E Visser; William Schwartz; Noga Kronfeld-Schor; Menno Gerkema; Theunis Piersma; Guy Bloch
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-11-19       Impact factor: 6.237

5.  Sticky Pi is a high-frequency smart trap that enables the study of insect circadian activity under natural conditions.

Authors:  Quentin Geissmann; Paul K Abram; Di Wu; Cara H Haney; Juli Carrillo
Journal:  PLoS Biol       Date:  2022-07-07       Impact factor: 9.593

6.  Artificial light at night as an environmental pollutant: An integrative approach across taxa, biological functions, and scientific disciplines.

Authors:  Davide M Dominoni; Randy J Nelson
Journal:  J Exp Zool A Ecol Integr Physiol       Date:  2018-10

7.  Nest initiation and flooding in response to season and semi-lunar spring tides in a ground-nesting shorebird.

Authors:  Martin Bulla; Clemens Küpper; Silvia Plaschke; Medardo Cruz-López; Salvador Gómez Del Ángel
Journal:  Front Zool       Date:  2019-05-23       Impact factor: 3.172

8.  Modelling animal movement as Brownian bridges with covariates.

Authors:  Bart Kranstauber
Journal:  Mov Ecol       Date:  2019-06-25       Impact factor: 3.600

9.  The bat-bird-bug battle: daily flight activity of insects and their predators over a rice field revealed by high-resolution Scheimpflug Lidar.

Authors:  Elin Malmqvist; Samuel Jansson; Shiming Zhu; Wansha Li; Katarina Svanberg; Sune Svanberg; Jens Rydell; Ziwei Song; Joakim Bood; Mikkel Brydegaard; Susanne Åkesson
Journal:  R Soc Open Sci       Date:  2018-04-04       Impact factor: 2.963

10.  Marine biorhythms: bridging chronobiology and ecology.

Authors:  Martin Bulla; Thomas Oudman; Allert I Bijleveld; Theunis Piersma; Charalambos P Kyriacou
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-11-19       Impact factor: 6.237

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