Literature DB >> 28989936

Closing the Data Loop: An Integrated Open Access Analysis Platform for the MIMIC Database.

Mohammad Adibuzzaman1, Ken Musselman1, Alistair Johnson2, Paul Brown3, Zachary Pitluk3, Ananth Grama4.   

Abstract

We describe a new model for collaborative access, exploration, and analyses of the Medical Information Mart for Intensive Care - III (MIMIC III) database for translational clinical research. The proposed model addresses the significant disconnect between data collection at the point of care and translational clinical research. It addresses problems of data integration, preprocessing, normalization, analyses (along with associated compute back-end), and visualization. The proposed platform is general, and can be easily adapted to other databases. The pre-packaged analyses toolkit is easily extensible, and allows for multi-language support. The platform can be easily federated, mirrored at other locations, and supports a RESTful API for service composition and scaling.

Entities:  

Year:  2017        PMID: 28989936      PMCID: PMC5630151          DOI: 10.23919/CIC.2016.7868698

Source DB:  PubMed          Journal:  Comput Cardiol (2010)        ISSN: 2325-887X


  11 in total

1.  Big data: The power of petabytes.

Authors:  Michael Eisenstein
Journal:  Nature       Date:  2015-11-05       Impact factor: 49.962

2.  Multiparameter Intelligent Monitoring in Intensive Care II: a public-access intensive care unit database.

Authors:  Mohammed Saeed; Mauricio Villarroel; Andrew T Reisner; Gari Clifford; Li-Wei Lehman; George Moody; Thomas Heldt; Tin H Kyaw; Benjamin Moody; Roger G Mark
Journal:  Crit Care Med       Date:  2011-05       Impact factor: 7.598

3.  "Big data" in the intensive care unit. Closing the data loop.

Authors:  Leo Anthony Celi; Roger G Mark; David J Stone; Robert A Montgomery
Journal:  Am J Respir Crit Care Med       Date:  2013-06-01       Impact factor: 21.405

4.  An investigation of patterns in hemodynamic data indicative of impending hypotension in intensive care.

Authors:  Joon Lee; Roger G Mark
Journal:  Biomed Eng Online       Date:  2010-10-25       Impact factor: 2.819

5.  A physiological time series dynamics-based approach to patient monitoring and outcome prediction.

Authors:  Li-wei H Lehman; Ryan P Adams; Louis Mayaud; George B Moody; Atul Malhotra; Roger G Mark; Shamim Nemati
Journal:  IEEE J Biomed Health Inform       Date:  2014-06-30       Impact factor: 5.772

6.  Red cell distribution width improves the simplified acute physiology score for risk prediction in unselected critically ill patients.

Authors:  Sabina Hunziker; Leo A Celi; Joon Lee; Michael D Howell
Journal:  Crit Care       Date:  2012-05-18       Impact factor: 9.097

7.  Mission and Sustainability of Informatics for Integrating Biology and the Bedside (i2b2).

Authors:  Shawn Murphy; Adam Wilcox
Journal:  EGEMS (Wash DC)       Date:  2014-09-11

8.  Making big data useful for health care: a summary of the inaugural mit critical data conference.

Authors:  Omar Badawi; Thomas Brennan; Leo Anthony Celi; Mengling Feng; Marzyeh Ghassemi; Andrea Ippolito; Alistair Johnson; Roger G Mark; Louis Mayaud; George Moody; Christopher Moses; Tristan Naumann; Marco Pimentel; Tom J Pollard; Mauro Santos; David J Stone; Andrew Zimolzak
Journal:  JMIR Med Inform       Date:  2014-08-22

9.  A Database-driven Decision Support System: Customized Mortality Prediction.

Authors:  Leo Anthony Celi; Sean Galvin; Guido Davidzon; Joon Lee; Daniel Scott; Roger Mark
Journal:  J Pers Med       Date:  2012-09-27

10.  MIMIC-III, a freely accessible critical care database.

Authors:  Alistair E W Johnson; Tom J Pollard; Lu Shen; Li-Wei H Lehman; Mengling Feng; Mohammad Ghassemi; Benjamin Moody; Peter Szolovits; Leo Anthony Celi; Roger G Mark
Journal:  Sci Data       Date:  2016-05-24       Impact factor: 6.444

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  1 in total

1.  Big data in healthcare - the promises, challenges and opportunities from a research perspective: A case study with a model database.

Authors:  Mohammad Adibuzzaman; Poching DeLaurentis; Jennifer Hill; Brian D Benneyworth
Journal:  AMIA Annu Symp Proc       Date:  2018-04-16
  1 in total

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