Literature DB >> 28987344

Uncharacterized ORF HUR1 influences the efficiency of non-homologous end-joining repair in Saccharomyces cerevisiae.

Katayoun Omidi1, Matthew Jessulat2, Mohsen Hooshyar1, Daniel Burnside1, Andrew Schoenrock3, Tom Kazmirchuk1, Maryam Hajikarimlou1, Mary Daniel1, Houman Moteshareie1, Urvi Bhojoo1, Megan Sanders1, Dindial Ramotar4, Frank Dehne3, Bahram Samanfar5, Mohan Babu2, Ashkan Golshani6.   

Abstract

Non-Homologous End Joining (NHEJ) is a highly conserved pathway that repairs Double-Strand Breaks (DSBs) within DNA. Here we show that the deletion of yeast uncharacterized ORF HUR1, Hydroxyurea Resistance1 affects the efficiency of NHEJ. Our findings are supported by Protein-Protein Interaction (PPI), genetic interaction and drug sensitivity analyses. To assess the activity of HUR1 in DSB repair, we deleted its non-overlapping region with PMR1, referred to as HUR1-A. We observed that similar to deletion of TPK1 and NEJ1, and unlike YKU70 (important for NHEJ of DNA with overhang and not blunt end), deletion of HUR1-A reduced the efficiency of NHEJ in both overhang and blunt end plasmid repair assays. Similarly, a chromosomal repair assay showed a reduction for repair efficiency when HUR1-A was deleted. In agreement with a functional connection for Hur1p with Tpk1p and NEJ1p, double mutant strains Δhur1-A/Δtpk1, and Δhur1-A/Δnej1 showed the same reduction in the efficiency of plasmid repair, compared to both single deletion strains. Also, using a Homologous Recombination (HR) specific plasmid-based DSB repair assay we observed that deletion of HUR1-A influenced the efficiency of HR repair, suggesting that HUR1 might also play additional roles in other DNA repair pathways.
Copyright © 2017 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  DNA repair; Double-strand breaks; Genetic interaction; HUR1; Homologous recombination; NEJ1; Non-homologous end joining; Plasmid repair assay; Protein-protein interaction; Saccharomyces cerevisiae; TPK1; YKU70; Yeast

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Substances:

Year:  2017        PMID: 28987344     DOI: 10.1016/j.gene.2017.10.003

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  3 in total

1.  Lithium chloride sensitivity connects the activity of PEX11 and RIM20 to the translation of PGM2 and other mRNAs with structured 5'-UTRs.

Authors:  Sasi Kumar Jagadeesan; Mustafa Al-Gafari; Maryam Hajikarimlou; Sarah Takallou; Houman Moteshareie; Azam Tayabali; Bahram Samanfar; Myron Smith; Ashkan Golshani
Journal:  Mol Cell Biochem       Date:  2022-05-22       Impact factor: 3.396

2.  Heavy metal sensitivities of gene deletion strains for ITT1 and RPS1A connect their activities to the expression of URE2, a key gene involved in metal detoxification in yeast.

Authors:  Houman Moteshareie; Maryam Hajikarimlou; Alex Mulet Indrayanti; Daniel Burnside; Ana Paula Dias; Clara Lettl; Duale Ahmed; Katayoun Omidi; Tom Kazmirchuk; Nathalie Puchacz; Narges Zare; Sarah Takallou; Thet Naing; Raúl Bonne Hernández; William G Willmore; Mohan Babu; Bruce McKay; Bahram Samanfar; Martin Holcik; Ashkan Golshani
Journal:  PLoS One       Date:  2018-09-19       Impact factor: 3.240

3.  Lithium Chloride Sensitivity in Yeast and Regulation of Translation.

Authors:  Maryam Hajikarimlou; Kathryn Hunt; Grace Kirby; Sarah Takallou; Sasi Kumar Jagadeesan; Katayoun Omidi; Mohsen Hooshyar; Daniel Burnside; Houman Moteshareie; Mohan Babu; Myron Smith; Martin Holcik; Bahram Samanfar; Ashkan Golshani
Journal:  Int J Mol Sci       Date:  2020-08-10       Impact factor: 5.923

  3 in total

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