Literature DB >> 28986655

GILP family: a stress-responsive group of plant proteins containing a LITAF motif.

C Cabreira-Cagliari1, D G S Fagundes2, N C F Dias2, B Bohn2, M Margis-Pinheiro1, M H Bodanese-Zanettini1, Alexandro Cagliari3.   

Abstract

Lipopolysaccharide-induced tumor necrosis factor-α (LITAF) is a membrane protein that is highly dependent on correct location to exert transcription factor activity and protein quality control. In humans, LITAF, PIG7 (p53-inducible gene 7), and SIMPLE (small integral membrane protein of the lysosome/late endosome) refer to the same gene, which acts as a tumor suppressor. Several studies have shown that the transcription factor activity and nuclear translocation of LITAF protein are critical for the induction of several immune cells via classical pathways. In plants, LITAF protein corresponds to the plasma membrane protein AtGILP (Arabidopsis thaliana GSH-induced LITAF domain protein). The conservation of LITAF proteins across species and their putative role is still unclear. In this study, we investigate the LITAF-containing proteins, which we call GILP proteins, in Viridiplantae. We identified a total of 59 genes in 46 species, whose gene copies range from one to three. Phylogenetic analysis showed that multiple copies were originated via block duplication posteriorly to monocot and eudicot separation. Analysis of the LITAF domain of GILP proteins allowed the identification of a putative domain signature in Viridiplantae, containing a CXXCX41HXCPXC motif. The subcellular location for the majority of GILP proteins was predicted to be in the plasma membrane, based on a transmembrane domain positioned within the LITAF domain. In silico analysis showed that the GILP genes are neither tissue-specific nor ubiquitously expressed, being responsive to stress conditions. Finally, investigation of the GILP protein network resulted in the identification of genes whose families are known to be involved with biotic and/or abiotic stress responses. Together, the expression modulation of GILP genes associated with their plasma membrane location suggests that they could act in the signaling of biotic/abiotic stress response in plants.

Entities:  

Keywords:  GILP genes; LITAF domain; Programmed cell death

Mesh:

Substances:

Year:  2017        PMID: 28986655     DOI: 10.1007/s10142-017-0574-8

Source DB:  PubMed          Journal:  Funct Integr Genomics        ISSN: 1438-793X            Impact factor:   3.410


  46 in total

1.  SIMPLE interacts with NEDD4 and TSG101: evidence for a role in lysosomal sorting and implications for Charcot-Marie-Tooth disease.

Authors:  Andrew J Shirk; Susan K Anderson; Sayed H Hashemi; Phillip F Chance; Craig L Bennett
Journal:  J Neurosci Res       Date:  2005-10-01       Impact factor: 4.164

2.  A novel lipopolysaccharide-induced transcription factor regulating tumor necrosis factor alpha gene expression: molecular cloning, sequencing, characterization, and chromosomal assignment.

Authors:  F Myokai; S Takashiba; R Lebo; S Amar
Journal:  Proc Natl Acad Sci U S A       Date:  1999-04-13       Impact factor: 11.205

3.  A model for p53-induced apoptosis.

Authors:  K Polyak; Y Xia; J L Zweier; K W Kinzler; B Vogelstein
Journal:  Nature       Date:  1997-09-18       Impact factor: 49.962

4.  The phylogeny and evolutionary history of the Lesion Simulating Disease (LSD) gene family in Viridiplantae.

Authors:  Caroline Cabreira; Alexandro Cagliari; Lauro Bücker-Neto; Márcia Margis-Pinheiro; Loreta B de Freitas; Maria Helena Bodanese-Zanettini
Journal:  Mol Genet Genomics       Date:  2015-05-17       Impact factor: 3.291

5.  Novel protein domains and repeats in Drosophila melanogaster: insights into structure, function, and evolution.

Authors:  C P Ponting; R Mott; P Bork; R R Copley
Journal:  Genome Res       Date:  2001-12       Impact factor: 9.043

6.  bZIP10-LSD1 antagonism modulates basal defense and cell death in Arabidopsis following infection.

Authors:  Hironori Kaminaka; Christian Näke; Petra Epple; Jan Dittgen; Katia Schütze; Christina Chaban; Ben F Holt; Thomas Merkle; Eberhard Schäfer; Klaus Harter; Jeffery L Dangl
Journal:  EMBO J       Date:  2006-09-07       Impact factor: 11.598

Review 7.  Functions of amine oxidases in plant development and defence.

Authors:  Alessandra Cona; Giuseppina Rea; Riccardo Angelini; Rodolfo Federico; Paraskevi Tavladoraki
Journal:  Trends Plant Sci       Date:  2006-01-09       Impact factor: 18.313

8.  WWOX binds the specific proline-rich ligand PPXY: identification of candidate interacting proteins.

Authors:  John H Ludes-Meyers; Hyunsuk Kil; Andrzej K Bednarek; Jeff Drake; Mark T Bedford; C Marcelo Aldaz
Journal:  Oncogene       Date:  2004-06-24       Impact factor: 9.867

Review 9.  Chromatin versus pathogens: the function of epigenetics in plant immunity.

Authors:  Bo Ding; Guo-Liang Wang
Journal:  Front Plant Sci       Date:  2015-09-02       Impact factor: 5.753

10.  Plant Innate Immunity Multicomponent Model.

Authors:  Giuseppe Andolfo; Maria R Ercolano
Journal:  Front Plant Sci       Date:  2015-11-13       Impact factor: 5.753

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