Literature DB >> 28984500

Ursolic acid and carvacrol may be potential inhibitors of dormancy protein small heat shock protein16.3 of Mycobacterium tuberculosis.

Babban Jee1, Sanjay Kumar2, Renu Yadav3, Yogesh Singh4, Anuj Kumar5, Naveen Sharma1.   

Abstract

Small heat shock protein16.3 (sHSP16.3) is a crucial protein for survival of Mycobacterium tuberculosis (MTB) in its host. Besides, this protein acts as a molecular chaperone during stress and is indispensable for MTB's growth, virulence and cell-wall thickening. sHSP16.3 is also a promising candidate for vaccine, serodiagnosis and drug design as well. In the present study, we have targeted sHSP16.3 with two phytochemicals, namely ursolic acid and carvacrol using in silico approach. Molecular docking analysis showed that both phytochemicals (ursolic acid and carvacrol) have docked with sHSP16.3 and shown tendency to inhibit the function of this vital protein of MTB. In addition, both compounds have exhibited strong compatibility with sHSP16.3 during whole 60 ns duration of molecular dynamics simulation. Further, the molecular mechanic/generalized Born/Poisson-Boltzmann surface area (MM/G/P/BSA) free energies were calculated which showed that both phytocompounds have stable and favourable binding energies causing strong binding with binding site of sHSP16.3. Taking together, the data of present study suggest that both phytocompounds may be potential inhibitor of sHSP16.3 of MTB and a best alternative to standard anti-tuberculosis drugs.

Entities:  

Keywords:  MD: Molecular dynamics; MTB: Mycobacterium tuberculosis; Mycobacterium tuberculosis; RMSD: Root-mean-square deviation; TB: Tuberculosis; carvacrol; in silico approach; sHSP16.3; sHSP16.3: Small heat shock protein16.3; ursolic acid

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Year:  2017        PMID: 28984500     DOI: 10.1080/07391102.2017.1389305

Source DB:  PubMed          Journal:  J Biomol Struct Dyn        ISSN: 0739-1102


  6 in total

1.  Identification, expression analysis, and molecular modeling of Iron-deficiency-specific clone 3 (Ids3)-like gene in hexaploid wheat.

Authors:  Priyanka Mathpal; Upendra Kumar; Anuj Kumar; Sanjay Kumar; Sachin Malik; Naveen Kumar; H S Dhaliwal; Sundip Kumar
Journal:  3 Biotech       Date:  2018-04-13       Impact factor: 2.406

2.  Potential of Natural Alkaloids From Jadwar (Delphinium denudatum) as Inhibitors Against Main Protease of COVID-19: A Molecular Modeling Approach.

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3.  Homology modeling and molecular dynamics based insights into Chalcone synthase and Chalcone isomerase in Phyllanthus emblica L.

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Review 4.  Understanding the early host immune response against Mycobacterium tuberculosis.

Authors:  Babban Jee
Journal:  Cent Eur J Immunol       Date:  2020       Impact factor: 2.085

Review 5.  A review on the phytochemical and pharmacological properties of Hyptis suaveolens (L.) Poit.

Authors:  Pratibha Mishra; Saima Sohrab; Sanjay Kumar Mishra
Journal:  Futur J Pharm Sci       Date:  2021-03-12

6.  In silico investigation of phytoconstituents from Indian medicinal herb 'Tinospora cordifolia (giloy)' against SARS-CoV-2 (COVID-19) by molecular dynamics approach.

Authors:  Papia Chowdhury
Journal:  J Biomol Struct Dyn       Date:  2020-08-07
  6 in total

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