Literature DB >> 28984218

Pedobacter solisilvae sp. nov., isolated from forest soil.

Dong Jin Yang1, Jin-Kyung Hong1.   

Abstract

The bacteria strain EN12T was isolated from forest soil in the Republic of Korea. The cells were Gram-negative, non-motile and rod-shaped, and the strain was strictly aerobic. Phylogenetic analysis of its 16S rRNA gene sequences showed that strain EN12T belonged to the class Sphingobacteriia of the phylum Bacteroidetes, and its closest relative is Pedobacter namyangjuensis 5G38T, with a sequence similarity of 95.5 %. The average DNA sequence similarity from validly described species within the genus Pedobacter was 92.5±1.3 %. Chemotaxonomic data including major ubiquinones (menaquinone-7), polar lipids (phosphatidylethanolamine and sphingolipid) and fatty acids (iso-C15 : 0, iso-C17 : 0 3-OH, and C16 : 1ω6c/C16 : 1ω7c) also supported an affiliation of strain EN12T with the genus Pedobacter. Genotypic and phenotypic differentiation of strain EN12T from six published Pedobacter species was revealed through DNA-DNA relatedness and physiological/biochemical tests. Results of these phenotypic, phylogenetic and chemotaxonomic analyses indicated that strain EN12T is a novel species in the genus Pedobacter, for which we propose the name Pedobacter solisilvae sp. nov. (=KCTC 42612T=LMG 28820T).

Entities:  

Keywords:  Pedobacter; forest soil; novel species

Mesh:

Substances:

Year:  2017        PMID: 28984218     DOI: 10.1099/ijsem.0.002383

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  3 in total

1.  Pedobacter aquicola sp. nov., isolated from freshwater.

Authors:  Yochan Joung; Hye-Jin Jang; Miri Park; Jaeho Song; Jang-Cheon Cho
Journal:  J Microbiol       Date:  2018-06-14       Impact factor: 3.422

2.  Pedobacter aquae sp. nov., a multi-drug resistant bacterium isolated from fresh water.

Authors:  Le Tran Tien Chau; Yong-Seok Kim; Chang-Jun Cha
Journal:  Antonie Van Leeuwenhoek       Date:  2022-02-06       Impact factor: 2.271

3.  Pedobacter pollutisoli sp. nov., Isolated from Tetrabromobisphenol A-Contaminated Soil.

Authors:  Yang Mu; Zhuang Ke; Chen-Xi Feng; Xiao-Wei Wang; Xiao-Wen Wang; Hong-Mei Wang; Qing Chen; Jian He
Journal:  Curr Microbiol       Date:  2019-02-13       Impact factor: 2.188

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.