Literature DB >> 28980401

Tournament ABC analysis of the western Palaearctic population history of an oak gall wasp, Synergus umbraculus.

Graham N Stone1, Sarah C White1, György Csóka2, George Melika3, Serap Mutun4, Zsolt Pénzes5, S Ebrahim Sadeghi6, Karsten Schönrogge7, Majid Tavakoli8, James A Nicholls1.   

Abstract

Approximate Bayesian computation (ABC) is a powerful and widely used approach in inference of population history. However, the computational effort required to discriminate among alternative historical scenarios often limits the set that is compared to those considered more likely a priori. While often justifiable, this approach will fail to consider unexpected but well-supported population histories. We used a hierarchical tournament approach, in which subsets of scenarios are compared in a first round of ABC analyses and the winners are compared in a second analysis, to reconstruct the population history of an oak gall wasp, Synergus umbraculus (Hymenoptera, Cynipidae) across the Western Palaearctic. We used 4,233 bp of sequence data across seven loci to explore the relationships between four putative Pleistocene refuge populations in Iberia, Italy, the Balkans and Western Asia. We compared support for 148 alternative scenarios in eight pools, each pool comprising all possible rearrangements of four populations over a given topology of relationships, with or without founding of one population by admixture and with or without an unsampled "ghost" population. We found very little support for the directional "out of the east" scenario previously inferred for other gall wasp community members. Instead, the best-supported models identified Iberia as the first-regional population to diverge from the others in the late Pleistocene, followed by divergence between the Balkans and Western Asia, and founding of the Italian population through late Pleistocene admixture from Iberia and the Balkans. We compare these results with what is known for other members of the oak gall community, and consider the strengths and weaknesses of using a tournament approach to explore phylogeographic model space.
© 2017 The Authors. Molecular Ecology Published by John Wiley & Sons Ltd.

Entities:  

Keywords:  Cynipidae; Hymenoptera; approximate Bayesian Computation; oak; phylogeography; western Palaearctic

Mesh:

Substances:

Year:  2017        PMID: 28980401     DOI: 10.1111/mec.14372

Source DB:  PubMed          Journal:  Mol Ecol        ISSN: 0962-1083            Impact factor:   6.185


  6 in total

1.  Multiple refugia from penultimate glaciations in East Asia demonstrated by phylogeography and ecological modelling of an insect pest.

Authors:  Wei Song; Li-Jun Cao; Bing-Yan Li; Ya-Jun Gong; Ary Anthony Hoffmann; Shu-Jun Wei
Journal:  BMC Evol Biol       Date:  2018-10-11       Impact factor: 3.260

2.  Identification of winter moth (Operophtera brumata) refugia in North Africa and the Italian Peninsula during the last glacial maximum.

Authors:  Jeremy C Andersen; Nathan P Havill; Yaussra Mannai; Olfa Ezzine; Samir Dhahri; Mohamed Lahbib Ben Jamâa; Adalgisa Caccone; Joseph S Elkinton
Journal:  Ecol Evol       Date:  2019-11-18       Impact factor: 2.912

3.  Population genomic signatures of the oriental fruit moth related to the Pleistocene climates.

Authors:  Li-Jun Cao; Wei Song; Jin-Cui Chen; Xu-Lei Fan; Ary Anthony Hoffmann; Shu-Jun Wei
Journal:  Commun Biol       Date:  2022-02-17

4.  Low levels of genetic differentiation with isolation by geography and environment in populations of Drosophila melanogaster from across China.

Authors:  Lei Yue; Li-Jun Cao; Jin-Cui Chen; Ya-Jun Gong; Yan-Hao Lin; Ary Anthony Hoffmann; Shu-Jun Wei
Journal:  Heredity (Edinb)       Date:  2021-03-08       Impact factor: 3.832

5.  Modelling the invasion history of Sinanodonta woodiana in Europe: Tracking the routes of a sedentary aquatic invader with mobile parasitic larvae.

Authors:  Adam Konečný; Oana P Popa; Veronika Bartáková; Karel Douda; Josef Bryja; Carl Smith; Luis O Popa; Martin Reichard
Journal:  Evol Appl       Date:  2018-10-20       Impact factor: 5.183

6.  The Ant-like Tachydromia Complex in the Iberian Peninsula-Insights from Habitat Suitability Modelling for the Conservation of an Endemism (Diptera: Hybotidae).

Authors:  Ana Rita Gonçalves; Carlos Vila-Viçosa; João Gonçalves
Journal:  Insects       Date:  2021-11-29       Impact factor: 2.769

  6 in total

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