Literature DB >> 28978443

Braun's Lipoprotein Facilitates OmpA Interaction with the Escherichia coli Cell Wall.

Firdaus Samsudin1, Alister Boags1, Thomas J Piggot2, Syma Khalid3.   

Abstract

Gram-negative bacteria such as Escherichia coli are protected by a complex cell envelope. The development of novel therapeutics against these bacteria necessitates a molecular level understanding of the structure-dynamics-function relationships of the various components of the cell envelope. We use atomistic MD simulations to reveal the details of covalent and noncovalent protein interactions that link the outer membrane to the aqueous periplasmic region. We show that the Braun's lipoprotein tilts and bends, and thereby lifts the cell wall closer to the outer membrane. Both monomers and dimers of the outer membrane porin OmpA can interact with peptidoglycan in the presence of Braun's lipoprotein, but in the absence of the latter, only dimers of OmpA show a propensity to form contacts with peptidoglycan. Our study provides a glimpse of how the molecular components of the bacterial cell envelope interact with each other to mediate cell wall attachment in E. coli.
Copyright © 2017 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2017        PMID: 28978443      PMCID: PMC5627309          DOI: 10.1016/j.bpj.2017.08.011

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  49 in total

1.  Electrostatics of nanosystems: application to microtubules and the ribosome.

Authors:  N A Baker; D Sept; S Joseph; M J Holst; J A McCammon
Journal:  Proc Natl Acad Sci U S A       Date:  2001-08-21       Impact factor: 11.205

2.  Structure of outer membrane protein A transmembrane domain by NMR spectroscopy.

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Journal:  Nat Struct Biol       Date:  2001-04

3.  Distribution of murein-lipoprotein between the cytoplasmic and outer membrane of Escherichia coli.

Authors:  V Bosch; V Braun
Journal:  FEBS Lett       Date:  1973-08-15       Impact factor: 4.124

4.  The covalent murein-lipoprotein structure of the Escherichia coli cell wall. The attachment site of the lipoprotein on the murein.

Authors:  V Braun; U Sieglin
Journal:  Eur J Biochem       Date:  1970-04

5.  Metabolism of the phosphatidylglycerol molecular species in Escherichia coli.

Authors:  M Kito; M Ishinaga; M Nishihara; M Kato; S Sawada
Journal:  Eur J Biochem       Date:  1975-05

6.  Distribution of lipids in cytoplasmic and outer membranes of Escherichia coli K12.

Authors:  E J Lugtenberg; R Peters
Journal:  Biochim Biophys Acta       Date:  1976-07-20

Review 7.  Murein (peptidoglycan) structure, architecture and biosynthesis in Escherichia coli.

Authors:  Waldemar Vollmer; Ute Bertsche
Journal:  Biochim Biophys Acta       Date:  2007-06-16

8.  New Interaction Parameters for Oxygen Compounds in the GROMOS Force Field: Improved Pure-Liquid and Solvation Properties for Alcohols, Ethers, Aldehydes, Ketones, Carboxylic Acids, and Esters.

Authors:  Bruno A C Horta; Patrick F J Fuchs; Wilfred F van Gunsteren; Philippe H Hünenberger
Journal:  J Chem Theory Comput       Date:  2011-03-25       Impact factor: 6.006

9.  Full-Length OmpA: Structure, Function, and Membrane Interactions Predicted by Molecular Dynamics Simulations.

Authors:  Maite L Ortiz-Suarez; Firdaus Samsudin; Thomas J Piggot; Peter J Bond; Syma Khalid
Journal:  Biophys J       Date:  2016-10-18       Impact factor: 4.033

10.  Mass spectrometry defines the C-terminal dimerization domain and enables modeling of the structure of full-length OmpA.

Authors:  Julien Marcoux; Argyris Politis; Dennis Rinehart; David P Marshall; Mark I Wallace; Lukas K Tamm; Carol V Robinson
Journal:  Structure       Date:  2014-04-17       Impact factor: 5.006

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  12 in total

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Authors:  Caitlin Sande; Catrien Bouwman; Elisabeth Kell; Nicholas N Nickerson; Sharookh B Kapadia; Chris Whitfield
Journal:  J Bacteriol       Date:  2019-06-21       Impact factor: 3.490

2.  Adaptation of the periplasm to maintain spatial constraints essential for cell envelope processes and cell viability.

Authors:  Eric Mandela; Christopher J Stubenrauch; David Ryoo; Hyea Hwang; Eli J Cohen; Von L Torres; Pankaj Deo; Chaille T Webb; Cheng Huang; Ralf B Schittenhelm; Morgan Beeby; J C Gumbart; Trevor Lithgow; Iain D Hay
Journal:  Elife       Date:  2022-01-27       Impact factor: 8.140

3.  Lpp positions peptidoglycan at the AcrA-TolC interface in the AcrAB-TolC multidrug efflux pump.

Authors:  James C Gumbart; Josie L Ferreira; Hyea Hwang; Anthony J Hazel; Connor J Cooper; Jerry M Parks; Jeremy C Smith; Helen I Zgurskaya; Morgan Beeby
Journal:  Biophys J       Date:  2021-08-17       Impact factor: 3.699

4.  An ancient divide in outer membrane tethering systems in bacteria suggests a mechanism for the diderm-to-monoderm transition.

Authors:  Anna Sartori-Rupp; Najwa Taib; Jerzy Witwinowski; Nika Pende; To Nam Tham; Daniel Poppleton; Jean-Marc Ghigo; Christophe Beloin; Simonetta Gribaldo
Journal:  Nat Microbiol       Date:  2022-03-04       Impact factor: 30.964

5.  Mechanics of Bacterial Interaction and Death on Nanopatterned Surfaces.

Authors:  Amar Velic; Jafar Hasan; Zhiyong Li; Prasad K D V Yarlagadda
Journal:  Biophys J       Date:  2020-12-15       Impact factor: 4.033

6.  The Fluorescent D-Amino Acid NADA as a Tool to Study the Conditional Activity of Transpeptidases in Escherichia coli.

Authors:  Alejandro Montón Silva; Christian Otten; Jacob Biboy; Eefjan Breukink; Michael VanNieuwenhze; Waldemar Vollmer; Tanneke den Blaauwen
Journal:  Front Microbiol       Date:  2018-09-04       Impact factor: 5.640

7.  Details of hydrophobic entanglement between small molecules and Braun's lipoprotein within the cavity of the bacterial chaperone LolA.

Authors:  Alister Boags; Firdaus Samsudin; Syma Khalid
Journal:  Sci Rep       Date:  2019-03-06       Impact factor: 4.379

8.  The lipoprotein Pal stabilises the bacterial outer membrane during constriction by a mobilisation-and-capture mechanism.

Authors:  Joanna Szczepaniak; Peter Holmes; Karthik Rajasekar; Renata Kaminska; Firdaus Samsudin; Patrick George Inns; Patrice Rassam; Syma Khalid; Seán M Murray; Christina Redfield; Colin Kleanthous
Journal:  Nat Commun       Date:  2020-03-11       Impact factor: 14.919

9.  New Provisional Function of OmpA from Acinetobacter sp. Strain SA01 Based on Environmental Challenges.

Authors:  Shahab Shahryari; Mahbubeh Talaee; Kamahldin Haghbeen; Lorenz Adrian; Hojatollah Vali; Hossein Shahbani Zahiri; Kambiz Akbari Noghabi
Journal:  mSystems       Date:  2021-01-12       Impact factor: 6.496

Review 10.  Insights into the structure of Escherichia coli outer membrane as the target for engineering microbial cell factories.

Authors:  Jianli Wang; Wenjian Ma; Xiaoyuan Wang
Journal:  Microb Cell Fact       Date:  2021-03-20       Impact factor: 5.328

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