Literature DB >> 28975798

Label-Free Single-Molecule Thermoscopy Using a Laser-Heated Nanopore.

Hirohito Yamazaki1, Rui Hu1,2, Robert Y Henley1, Justin Halman3, Kirill A Afonin3, Dapeng Yu2, Qing Zhao2, Meni Wanunu1.   

Abstract

When light is used to excite electronic transitions in a material, nonradiative energy during relaxation is often released in the form of heat. In this work, we show that photoexcitation of a silicon nitride nanopore using a focused visible laser results in efficient localized photothermal heating, which reduces the nearby electrolyte viscosity and increases the ionic conductance. In addition, a strong localized thermal gradient in the pore vicinity is produced, evidenced by finite-element simulations and experimental observation of both ion and DNA thermophoresis. After correcting for thermophoresis, the nanopore current can be used as a nanoscale thermometer, enabling rapid force thermoscopy. We utilize this to probe thermal melting transitions in synthetic and native biomolecules that are heated at the nanopore. Our results on single molecules are validated by correspondence to bulk measurements, which paves the way to various biophysical experiments that require rapid temperature and force control on individual molecules.

Entities:  

Keywords:  Nanopore; melting kinetics; optics; single molecule; thermophoresis

Year:  2017        PMID: 28975798     DOI: 10.1021/acs.nanolett.7b03752

Source DB:  PubMed          Journal:  Nano Lett        ISSN: 1530-6984            Impact factor:   11.189


  7 in total

Review 1.  Localized Nanopore Fabrication via Controlled Breakdown.

Authors:  Cuifeng Ying; Tianji Ma; Lei Xu; Mohsen Rahmani
Journal:  Nanomaterials (Basel)       Date:  2022-07-12       Impact factor: 5.719

Review 2.  Recent advances in integrated solid-state nanopore sensors.

Authors:  Mahmudur Rahman; Mohammad Julker Neyen Sampad; Aaron Hawkins; Holger Schmidt
Journal:  Lab Chip       Date:  2021-06-17       Impact factor: 7.517

3.  Dynamics and inhibition of MLL1 CXXC domain on DNA revealed by single-molecule quantification.

Authors:  Lin Liang; Kangkang Ma; Zeyu Wang; Richard Janissen; Zhongbo Yu
Journal:  Biophys J       Date:  2021-07-17       Impact factor: 3.699

4.  Lifetime and Stability of Silicon Nitride Nanopores and Nanopore Arrays for Ionic Measurements.

Authors:  Yung-Chien Chou; Paul Masih Das; Dimitri S Monos; Marija Drndić
Journal:  ACS Nano       Date:  2020-04-27       Impact factor: 18.027

5.  Thermostable virus portal proteins as reprogrammable adapters for solid-state nanopore sensors.

Authors:  Benjamin Cressiot; Sandra J Greive; Mehrnaz Mojtabavi; Alfred A Antson; Meni Wanunu
Journal:  Nat Commun       Date:  2018-11-07       Impact factor: 14.919

6.  Laser-based temperature control to study the roles of entropy and enthalpy in polymer-nanopore interactions.

Authors:  Christopher E Angevine; Joseph W F Robertson; Amala Dass; Joseph E Reiner
Journal:  Sci Adv       Date:  2021-04-21       Impact factor: 14.136

Review 7.  Label-Free Optical Analysis of Biomolecules in Solid-State Nanopores: Toward Single-Molecule Protein Sequencing.

Authors:  Yingqi Zhao; Marzia Iarossi; Angela Federica De Fazio; Jian-An Huang; Francesco De Angelis
Journal:  ACS Photonics       Date:  2022-02-25       Impact factor: 7.077

  7 in total

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